DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and LOC108190403

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_021327440.1 Gene:LOC108190403 / 108190403 -ID:- Length:2219 Species:Danio rerio


Alignment Length:2336 Identity:864/2336 - (36%)
Similarity:1276/2336 - (54%) Gaps:355/2336 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKGEYVWVKPQNTTSEFAVPFGARIVRTEKTQTLVCDDRNKQFWVPAGDVLKAMHITSQEDVEDM 72
            |||:||||...:     .|..||.:..::..|..:.||..|:..:.....||.||.||...|:||
Zfish     5 RKGDYVWVDCSD-----GVQIGAEVRLSDTGQLQLIDDEGKEHKIKKESTLKPMHPTSVNGVDDM 64

  Fly    73 ITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIF 137
            |.||||.|..:||||..||.:..|||||||:|||:||||:|||||..:::.|.::.|.:||||:|
Zfish    65 IRLGDLNEAGLLRNLLVRYKEGAIYTYTGSILVAVNPYQLLPIYTPEQVEQYTDRRLGDLPPHVF 129

  Fly   138 AISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKHSWIEQQIIEANPIMEAFG 202
            ||:|:.|..::|.:::||.:|||||||||||||||:||:|||:||:.||||||::|||||:||||
Zfish   130 AIADSCFFNMRRNRKDQCCIISGESGAGKTESTKLMLQFLAAVSGQRSWIEQQVLEANPILEAFG 194

  Fly   203 NAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTA 267
            ||||:||||||||||||:|.|...|||:||||:||||||||:..|:..|||||||||||.|:...
Zfish   195 NAKTIRNDNSSRFGKYIDIHFNKSGAIEGARIEQYLLEKSRVCRQASQERNYHIFYCMLMGMPAD 259

  Fly   268 ERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHL 332
            :::.|.|  .:.::|:||..|.|.:..||.|.|::|..|:|||:|:|...:.|.|..|||:||||
Zfish   260 QKKILSL--GNAAEYNYLTMGKCTSCEGRDDIKEYASFRSAMKILTFTENDTWEINKLLASILHL 322

  Fly   333 GNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIE 397
            ||:.|..|.:.||...:|..:.:.:...|||.:..:||:|:||||::..:.|.||..|:...|::
Zfish   323 GNVDFEETIMNNLEGCDILSSTHFKMATQLLEVAPNALDASLTQRSLMTNRESVTKPLTSAQALD 387

  Fly   398 GRDAFVKSLYDGIFVRIVRRINETINK-QVDQP---MNSIGVLDIFGFENFDNNSFEQLCINYAN 458
            |||||||::|..:||.||.:||..|.| ..|.|   .:|||:|||||||||.||||||||||:||
Zfish   388 GRDAFVKAIYGRLFVWIVTKINSAIYKPPSDDPKHVRHSIGLLDIFGFENFKNNSFEQLCINFAN 452

  Fly   459 ENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQT 523
            |.||||||.|:||:||.||..|.|.|::|||.|||..||::.:|.:|::|||||||:||||||.|
Zfish   453 EQLQQFFVKHVFKLEQQEYAREDIVWKNIEFNDNQSTLDVLAIKSLNILSLIDEESRFPKGTDAT 517

  Fly   524 LLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKY 588
            :|.|::..||...||:..|....:.|||||:||||.|:..||||||||:.|.|:..|:..|:||.
Zfish   518 MLNKMNQHHGKGDIYMPPKNNHETQFGIRHFAGVVHYDSKGFLEKNRDALSSDIIQLIHTSSNKL 582

  Fly   589 LVDIFPHEM----------------------PMDTAKKQPTLCVKFRNSLDMLMRTLSQAHPYFI 631
            |..||..|:                      ..||.|:.|||..:||.|||.||:||:...|:||
Zfish   583 LKQIFHSEISTIEGKTSINHTIVTPKSSLRQTADTKKQVPTLTGQFRQSLDSLMKTLTACQPFFI 647

  Fly   632 RCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQC 696
            ||||||::|:|..||:|||:|||||||||||.|||:|||||||.:..|:||||:|:...    .|
Zfish   648 RCIKPNDFKKPMLFDRELCIRQLRYSGMMETIRIRKAGYPIRHTFDEFLERYRVLLKST----VC 708

  Fly   697 D-----CRKLARQICEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVL 756
            |     .:|....||::.|..| |.:.||||:||:|..|..|||.|.:.:.:..:.||:.:|...
Zfish   709 DPQTETVKKCCESICKIILTED-DWKIGKTKVFLKDFHDTVLELARDKALNEKALLIQKVLRGYK 772

  Fly   757 FRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALS 821
            .|:...|.|.|.:|:|:.|||...|:.|:|::.|:.||.|.:.::::..::...|..|:.||:.:
Zfish   773 HRKAFLRKRGAAVTIQKTWRGHKGRKLYRVVQLGYARLQAQVRSRKMAWEYKQKRKATLLLQSQT 837

  Fly   822 RGYLVRKDFQKK-------------LLERRKQNQLKKEELLKLAKMKEAEELLRLQQLKEQKERE 873
            ||.|.||::::|             .|.|:..|::|::..|.|.: :.||||..|          
Zfish   838 RGCLARKEWKRKRDAVILLQAYTRGTLARKAVNKMKRDAFLSLQE-RRAEELAAL---------- 891

  Fly   874 QREQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVA 938
               ::::||:|                 .::|||..:..:|                        
Zfish   892 ---ERQRRLEE-----------------VLRQKREREAAQQ------------------------ 912

  Fly   939 APLPTRPASAVTRINTIPESPGTIDVESSKQMVDDVFRFLN--------------DEPDAALRKL 989
                                   ::..:.::||||:|.||.              ::.:.....|
Zfish   913 -----------------------LESITDQEMVDDIFGFLPSMVGGQEGQAPVGFEDLEGKRTVL 954

  Fly   990 NNISSGDTIRLPKSVPNNIDTSDFSYLKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMASKA 1054
            ..:...|...:|....:..|..::|:.|:|:.||.|.||..|.|:.|::.||.||...|.:||..
Zfish   955 EEVDLDDAPMMPIPEEDYDDLDEYSFSKFASMYFQGAATPTHIRQRLRQPLLYHEDENDVLASLT 1019

  Fly  1055 IWLTILRFMGDLPD----VVS-SPTLHVFDNENLMSDLAS------------------------- 1089
            :|..|||||||||:    ||| |.|  .|.:.::..|:||                         
Zfish  1020 VWWMILRFMGDLPEPKAQVVSRSGT--AFADRSVQKDVASRQDRRLSHMVGVDQRIRNSRIVQNK 1082

  Fly  1090 --------------------LL------------------------------------------- 1091
                                ||                                           
Zfish  1083 AVPTVPEEASRNRKSSTFTDLLSRSRKSVQDDGVPNRKLSALPEQGPRNRKTSTFTDIMSRNRKT 1147

  Fly  1092 --------NTSDSYKPRLFVRQSQRRIPKPLAS-----GEKEAQEFYQHWLNVPTSHLEKIHFII 1143
                    |...:.||.:...:::.....|..|     .|::........|:.|.:.|||:|.|:
Zfish  1148 STAEGPPSNKRSARKPSVIAEEAEDGSEVPRQSTVQTISEEDEMNTDGLTLDRPMTSLEKLHIIV 1212

  Fly  1144 GHGIIKNSLRDEILAQICKQLYLNPSRSSYSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQL 1208
            |:.|::..|||||..||||||..|.:|.|:.|||:|||:||..|||::.|..:|:||::.|... 
Zfish  1213 GYAIVRRDLRDEIYCQICKQLQENSNRGSFFRGWILLSICLGIFPPTERFIKYLQSFLRFGPVG- 1276

  Fly  1209 QATPSLQRLERTLVNGPRCQPPSLFELHAIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVNQL 1273
            .|....:||.||:.||.|.:|||..||.|.:.:.|:.:.:.||||:...:.||:|||::|....|
Zfish  1277 YAPYCAERLRRTVANGVRGEPPSWLELQATKSKKPIAISVTLMDGRTISMPVDSASTSKEVCQML 1341

  Fly  1274 CQGMGLTDTFGFGLVMSLNGKLMPLGAGQEHVLDAISECEQ-------RQLDAPWKLYIRKEMFA 1331
            .|.:.|.|||||.:.::|..|:..||:|:|||:||||:|||       ::..|||:||.|||:||
Zfish  1342 SQKVKLQDTFGFSIYVALYDKVWSLGSGREHVMDAISQCEQEVKRKGGQEQHAPWRLYFRKEVFA 1406

  Fly  1332 TWYDPSMDPKATQLIYKQILNGLKCGEYRCRSEKDIAMVCALACFVEYGPGEILRLKPSEITAFV 1396
            .|:|.:.|..:|.|||:|::.|||.|||:|..|:|...:.|...:|::|....:....:.:...:
Zfish  1407 PWHDCAQDNVSTDLIYRQVIRGLKYGEYQCEKEEDYVGLAAKHFYVQHGSDISMENTKTVVRECI 1471

  Fly  1397 PSDLLAPGERAIENWSRLIAATYEKSSYVKEEQNDLLLEAQKRAKEDICLFAHLSWPMRHSRLFE 1461
            .|.||.  .::.:.|::::...:.:..::.....      ..:.|.::..||...|||..|:.||
Zfish  1472 NSKLLE--AKSEDKWAQMVNTAHAQGPFITSRTK------SDKVKAEVVDFARQKWPMFFSKFFE 1528

  Fly  1462 VVRKEGPKLQSDELMLGINSAGLFLIDETEQVLASCCFSEVLKVHVESDDKLHVMTFQHVNFVLQ 1526
            |.:..||.|...:.:|.|||.|:..:||.|:.|....:.|:..|:...:.|...:.....:|.|.
Zfish  1529 VAKLSGPPLPKSKFILAINSTGITFLDEREKNLLILSYPELTGVNTIRERKCVCLLTLKGDFTLN 1593

  Fly  1527 CSSAQDANEVINYMLDNLRQRSSYGVALDPVVEGDLEDCLVLNPGDLI------EFEAGVTGAQL 1585
            ...|.:.::::...|..|.|||.|.|||..|...|....|.....:||      ||.|.      
Zfish  1594 AIMAVEISDLVAMFLAGLIQRSQYAVALQEVNRQDDRTILSFKKAELIYLIKDEEFSAA------ 1652

  Fly  1586 MAGNAQDCYRGCV------NGQWGQFLAGNVRVLATLTKPSEKLQDIL--------------REG 1630
                     ||.:      .|:.|...|..|.:|.|||||:.::..::              .:|
Zfish  1653 ---------RGWLKGKNERTGEIGAIPADAVLILPTLTKPTNEVLSLISLSPDQRKTIIDNTSKG 1708

  Fly  1631 RFQEPPKPTPRANYSRRRQHNISQLAESHFREPL-DSDKAPLSK---------FSPEPLKAPLLK 1685
            ...|...|:           .:.:.:..:||.|: |.::..:||         .|.||::.||||
Zfish  1709 TLTERVAPS-----------TLKEFSVEYFRPPIKDVNRQVISKNATPERLWANSREPIRQPLLK 1762

  Fly  1686 AVVKVPPLFQQALVMHHHILKYMGDI----ARSNLPVNTDLIFQPALQHPLLCDELYCQLMKQLS 1746
            .:|..|.|..||..:...|||||||.    .:|.|.: ||.||.|..|:..|.||:|||:|||::
Zfish  1763 RLVGNPDLSPQACQVFTAILKYMGDYPTRQVQSPLEL-TDQIFGPPTQNEELRDEIYCQIMKQMT 1826

  Fly  1747 DNPSSESEKRGWDLLYLATGLVAPSVLVMR--ELIILLRMRADALADACLKRLKRSLAQGQRKKA 1809
            .|.:..|.::||.||:|..||..||..:|:  :..|..|.| :.||..||:||:.:.....||..
Zfish  1827 SNNNRYSIEQGWQLLWLCCGLFPPSNSLMKHAQRFIETRKR-EPLATDCLQRLQGARRMDPRKLP 1890

  Fly  1810 PHLIEVEGIQQRCLHIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLELKSPVGYSIFLKTGD 1874
            ||.:||:.|||....|:||||||:|:.|.||:.::|:..:|:..||.:|.|.:..|:|:|:||.|
Zfish  1891 PHQVEVDAIQQNSTQIFHKIYFPNDSQEIFEVATNTKIRDLVRTIANKLMLSTAEGFSLFMKTPD 1955

  Fly  1875 RVYAMPEEEFVFDFITQLIYWLRQQRTIR-----SISDGQYQLHFMRKLWLNNHPGEDLNGDMIF 1934
            :|.::.|.::.||.:.|:..|.::.:.:.     ::|   |.:.||||||.|..||.|:..|:||
Zfish  1956 KVLSLNETDYFFDSLRQITDWSKRAKRVNQGAPVNVS---YTVFFMRKLWFNIIPGRDVEADLIF 2017

  Fly  1935 SYPQELHKYLKGYYPIDCEQASRLAILVY--SADHD-VSLQRLPEVLTRLIPEDLIPLQTVAEWR 1996
            .|||||.|||:||:....|:...|..|::  ..::| .....:|::|..|:|.|.:...:..||:
Zfish  2018 HYPQELPKYLRGYHRCTKEEMVMLGALLFRVKVNNDKTQFPMIPKMLKDLVPNDQLKALSADEWK 2082

  Fly  1997 QQILPKVHRD-HLTEDHAKILFLQELSHFACFGSTFFVVKQQNDDALPETLLIAINSTGFHMLDP 2060
            :.|..:.::. .:|.:.|.|.||:.:..:..||..||.|||.::...|:.:.:||:..|..:::|
Zfish  2083 KSIFAEYNKQTGMTVEEAMIGFLKIVYKWPTFGCAFFDVKQTSEPNFPDIVRMAISKQGITIINP 2147

  Fly  2061 TTKEILRSYEYSQLGIWSSGKNHFHIRFGNMIGASKLLCSTTQGYKMDDLLASYVK-YFNE 2120
            .||:.|..:.|:::..|.||..:||:..||::..:|:||.|:.||||||||.|||. |.||
Zfish  2148 KTKDALAIHPYNKIANWCSGSTYFHMTVGNLVKGNKILCETSLGYKMDDLLTSYVNMYLNE 2208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 378/705 (54%)
MYSc_Myo7 81..726 CDD:276832 360/675 (53%)
IQ 765..785 CDD:197470 8/19 (42%)
DUF4355 827..>887 CDD:290964 17/72 (24%)
MyTH4 1031..1239 CDD:295320 90/313 (29%)
B41 1248..1429 CDD:214604 67/187 (36%)
FERM_N 1248..>1288 CDD:286467 18/39 (46%)
FERM_B-lobe 1342..1429 CDD:271216 21/86 (24%)
PH-like 1454..1547 CDD:302622 25/92 (27%)
MyTH4 1674..1819 CDD:214535 63/150 (42%)
B41 1827..2032 CDD:214604 72/213 (34%)
FERM_N 1829..>1877 CDD:286467 20/47 (43%)
FERM_M 1936..2032 CDD:278785 29/99 (29%)
FERM_C2_MyoVII 2028..2121 CDD:270020 40/94 (43%)
LOC108190403XP_021327440.1 MYSc_Myo7 73..742 CDD:276832 360/675 (53%)
IQ 779..801 CDD:197470 9/21 (43%)
MyTH4 <1198..1307 CDD:214535 53/109 (49%)
B41 1314..1527 CDD:214604 74/220 (34%)
FERM_C1_MyoVII 1521..1614 CDD:270019 25/92 (27%)
SH3 1615..1676 CDD:327375 19/75 (25%)
MyTH4 1752..1900 CDD:214535 63/149 (42%)
B41 1907..2119 CDD:214604 72/214 (34%)
FERM_C2_MyoVII 2115..2210 CDD:270020 40/94 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593574
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D21221at33208
OrthoFinder 1 1.000 - - FOG0001409
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 1 1.100 - - O PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

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