DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo28B1 and myo10.2

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_031749628.1 Gene:myo10.2 / 100495096 XenbaseID:XB-GENE-5995373 Length:1997 Species:Xenopus tropicalis


Alignment Length:2289 Identity:615/2289 - (26%)
Similarity:975/2289 - (42%) Gaps:551/2289 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 MHITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQ-ILPIYTNREIQLY 124
            ||.:|:|.||||..|.||.|.:|:.||:.||.:..|||..||:|.::|||: |..:|..:.:.||
 Frog     1 MHQSSREGVEDMSLLSDLHEASIMLNLRLRYQQDKIYTNIGSILASVNPYKSIAGLYDEKCVDLY 65

  Fly   125 RNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAIS-------G 182
            .:....|||||||||::..::.|.:..::|||:|||||||||||||||:|::|:::|       |
 Frog    66 SSHHFGELPPHIFAIANECYRCLWKRHDSQCVLISGESGAGKTESTKLLLKFLSSMSQNSAGGGG 130

  Fly   183 KHSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQ 247
            ..:.:|:.|:|::||:|||||||||.|:|||||||:|::.|:.||.|||.|:..|||||:|:..|
 Frog   131 TQTHVEEAIMESSPILEAFGNAKTVYNNNSSRFGKFIQLHFSEQGHIQGGRVVDYLLEKTRVTRQ 195

  Fly   248 SRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVL 312
            |..||||||||.:|.|.:..|:|.|.|.:  |..|.||...||.|..|..|...:..:.||::|:
 Frog   196 SPGERNYHIFYALLTGANREEKEALGLSD--PHTYQYLRASGCATAEGLNDKDMYEKVLAALQVM 258

  Fly   313 SFKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQR 377
            .|..||:..:..||:.||.||||.|.....|.:.|..:     |...|.|||:....|:..||||
 Frog   259 DFSDEEIREVWKLLSGILQLGNLEFMTAGGAQITTKAV-----LSDAADLLGLDSFQLSEVLTQR 318

  Fly   378 TIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFE 442
            ::.:.||.:::.|:.|.|.:.||:...:||...|..::.|||..|..:  :...|:|:|||||||
 Frog   319 SMILRGEEISSPLTVEQATDSRDSLAMALYAQCFSWLLGRINARIRGK--ENFKSVGILDIFGFE 381

  Fly   443 NFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLM 507
            ||..|.|||..||||||.||::|..|||.:||.||..|.|:|..|.:.||.:.|||| .|.:.::
 Frog   382 NFQVNRFEQFNINYANEKLQEYFNKHIFSLEQLEYNREGIHWDAIGWMDNAECLDLI-EKKLGIL 445

  Fly   508 SLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDS 572
            :||:|||:||||||.|||||||.||.|...|||.:.|:.. |||:||||.|.|:..||||||||:
 Frog   446 ALINEESRFPKGTDFTLLEKLHNQHSNNPHYVKPRVTEHQ-FGIKHYAGEVTYDVQGFLEKNRDT 509

  Fly   573 FSGDLRTLVQRSTNKYLVDIF--------PHEMPMDTAKKQPTLCVKFRNSLDMLMRTLSQAHPY 629
            |..|:..:::.|...::.|:|        ...:.|.|.:|:||:..:||.||..||..||.::|:
 Frog   510 FRDDILNMLRDSRLDFVYDLFEKVCSRNSEETLKMGTQRKKPTVSSQFRESLHSLMAMLSTSNPF 574

  Fly   630 FIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLE 694
            ||||||||..|....|:.::.:.|||||||:||.:|||||:|:|..|:.|..||::|:..:...:
 Frog   575 FIRCIKPNTEKLSNTFNPDVVLNQLRYSGMLETVKIRRAGFPVRRLYQDFASRYKMLIKNLKATD 639

  Fly   695 QCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVLFRR 759
              |.|.......:....:..:.|.|:||:||::..:..||..|...:.::...|...|:..:.|:
 Frog   640 --DVRGKCAAFLQFYEGSKKEWQLGRTKVFLKEALEQKLEKSREGELRRAASVICAHIQGYIARK 702

  Fly   760 YMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGY 824
            ...|.|.:|:|:|:.:|....|..|..:||.                       .::.|...||.
 Frog   703 QFTRVRLSIVTIQKNYRAHFWRATYLRLRQS-----------------------AVQFQKHWRGT 744

  Fly   825 LVRKDFQKKLLERRKQNQLKKEELLKLAKMKEAEELLRLQQLKEQK----EREQREQQEKRLQEE 885
            :.|:.:|:.|.|.||:.:  :||    .|.||.|| .|.::|:||:    ||::||::|||  |:
 Frog   745 VARRLYQQMLEEERKRRE--EEE----RKRKEEEE-RRRRELEEQRRIEEERKRREEEEKR--EQ 800

  Fly   886 QRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVT 950
            :||:||..|                 .::|..||..|:                           
 Frog   801 ERLEAELRA-----------------AQEEQEKAKNLE--------------------------- 821

  Fly   951 RINTIPESPGTIDVESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVPNNIDTSDFSY 1015
              |.:.:       |..::.::::.|.     :..:.||::....|                   
 Frog   822 --NILLQ-------EEERRQMEEILRL-----EKEIEKLHHQQKLD------------------- 853

  Fly  1016 LKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTLHVFDN 1080
                    |...:....||.|.:...:..|.:::.||:                |:...|.:.|.
 Frog   854 --------GVSTSCTETRKELIRQREEQIHKLEKEASR----------------VAQEFLELLDF 894

  Fly  1081 ENLMSDLASLLNTSD---SYKPRLFVRQSQRRI-------------PKPLA---SGEKEAQEFYQ 1126
            .||.....||.|..|   |.:..:....::..:             |.|:.   .|.:.::.|.:
 Frog   895 GNLEESAHSLENGFDGTVSAEGSMVAPLAEEEVDEGFHADDEMLPPPPPMLLEDDGPRTSESFSE 959

  Fly  1127 H--WLNVPTSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRSSYSRGWLLLSLCLSCFPP 1189
            .  :.|:|..       :.|           ..:..|.:..|:||.                 ||
 Frog   960 EETYTNIPMD-------VPG-----------AQSSSCTETPLSPSE-----------------PP 989

  Fly  1190 SKEFEPHLRSFMKQGTAQLQATPSL-QRLERTLVNGPRCQ------PPSL--------FELHAIR 1239
            |.: :|:        :|....:.|: |.:..||......|      ||.:        |: .|..
 Frog   990 SAQ-DPY--------SAISDKSESIYQCVSDTLSTSEEPQEPIYSYPPDVESDYDHEEFD-EAPP 1044

  Fly  1240 GRHPLRLDIHLMDGQQRRL-----------QVDAASTAREAVN-------QLCQGM------GLT 1280
            |......|.||.|.:..|:           .||:...:.|.|:       :|..|.      |..
 Frog  1045 GSSMNLSDGHLTDEEIMRISQPGSFGSRCGSVDSFLDSDEEVDSHIDTDEELMTGRVTLFNGGGP 1109

  Fly  1281 DTFGFGLVMSLNGKLMPLGAGQEHVL--DAIS--ECEQRQLDAPWKLYIRKEMFAT-----WYDP 1336
            ..|...|.|...| ||.:...:..||  |...  ..:|..|.:.| ||.:....:|     |...
 Frog  1110 PYFHSYLYMKAGG-LMNIWRRRWCVLKDDTFMWFRTKQEALKSGW-LYKKGGGMSTLSRRNWKRR 1172

  Fly  1337 SMDPKATQLIYKQILNGLKCGEYRCRSEKDIAMVCALACFVEYGPGE-----ILRLKPSEITAFV 1396
            ....:.::|:|.:     ...|.|.|...||....|:   ::....|     :...:...|.|..
 Frog  1173 WFVLRESKLMYFE-----NDSEERLRGTIDIRTAKAV---IDIHEKENALDIVTEERTYHIVAET 1229

  Fly  1397 PSDLLAPGERAIENW----SRLIAATYEKSSYVKEEQN---------DLLL-------EAQKRAK 1441
            |.|  |.|      |    ||:.:||.::...:::||.         |:.|       :...|..
 Frog  1230 PED--ASG------WFNVLSRVHSATSQQLRDMRDEQANPKNAVGTLDVGLIDSVCASDCPDRPN 1286

  Fly  1442 EDICLFAH--------LSWPMRH-SRLFEVVRKEGPKLQSDELMLGINSAGLFLIDETEQVLASC 1497
            ..:.:.|:        ::..|.| ..|.:..|.|. |:...|          ||:          
 Frog  1287 SFVIITANRVIHCNTDIAEEMHHWISLLQKPRGEA-KVDGQE----------FLV---------- 1330

  Fly  1498 CFSEVLKVHVESDDKLHVMTFQHVNFVLQCSSAQDANEVINYMLDNLRQRSSYGVALDPVVEGDL 1562
              ...|...|:|.:|...:..:...|||..:|           ||..:.....|..|..:|...|
 Frog  1331 --RGWLHKEVQSSNKTASLKLKRRWFVLNRNS-----------LDYYKSSERGGSKLGTLVLNSL 1382

  Fly  1563 EDCLVLNPGDLIEFEAG-----VTGAQLMAGNAQDCYRGCVNG--QWGQFLAGNVRVLATLTKPS 1620
              |.|:.|.:.:..|.|     |.|.:    ::...|...:|.  :|...:.|.:...|.:..|:
 Frog  1383 --CSVVQPDEKVHSETGYWNLVVYGRK----HSYRLYTKLLNEAMRWANAIQGVIDSKAPIETPT 1441

  Fly  1621 EKL-QDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFREPLDSDKAPLSKFSPEPLKAPLL 1684
            ::| :||.......|..:.|.:.|                          |:.:::..||.:|||
 Frog  1442 QQLIRDIKENSLNSEAVEQTYKRN--------------------------PILRYTQHPLHSPLL 1480

  Fly  1685 KAVVKVPPL-----------------FQQALVMHHHILKYMGDIARSNLPVNTDLIFQPALQH-- 1730
                   ||                 .|...|   .|...:.:|.....||.   |.|..||.  
 Frog  1481 -------PLPYGDVNLNLQKEKGYTTLQDEAV---RIFNSLQEIETVPDPVP---IIQGILQTCQ 1532

  Fly  1731 --PLLCDELYCQLMKQLS--DNPSSESEKRGWDLLYLATGLVAPSVLVMRELIILLRMRADA--- 1788
              ..|.||:||||:||.:  ..|:|....|.|.||...:....|...::|.|...|:...|:   
 Frog  1533 DLKSLRDEVYCQLIKQTNHVPEPNSPGNLRHWQLLSCMSCTFLPGRDILRYLKFHLKRVRDSFPG 1597

  Fly  1789 ---------LADACLKRLKRSLAQGQRKKAPHLIEVEGIQQRCLHIYHKIYFPDDTVEAFEIESH 1844
                     :.|| ||:.|      .|:..|...|:..:..|. |:...:|..........|.||
 Frog  1598 TEVEQFAHFIVDA-LKKTK------CREMVPSQEEISALLTRS-HMTTSVYCHGGGSCQISINSH 1654

  Fly  1845 TRGAELIADIAQRLEL-KSPVGYSIF--LKTGDRVYAMPEEEFVFDFITQLIYWLRQQRTIRSIS 1906
            |...|::..:.:.|.: .|...:::|  .|..||  |:.....|.|.:.:   :.|...|.....
 Frog  1655 TTAGEVVEKLIRGLSMDNSRNMFALFEHNKHTDR--AVESRVIVADVLAK---FERMAGTADEED 1714

  Fly  1907 D-GQYQLHFMRKLW----LNNHPGEDLNGDMIFSYPQELHKYLKGYYPIDCEQASRLAILVYSAD 1966
            | |.:.|:|  ||:    :.:.|.|.:  :..|.:.|.......|::|...|....||.|.....
 Frog  1715 DPGPWNLYF--KLYCFLDVQSVPKEGI--EFAFMFEQAHESLTSGHFPAPEETLQHLAALRLQYQ 1775

  Fly  1967 H-DVS-----------LQRL--------------------------------------------- 1974
            | |.|           :|||                                             
 Frog  1776 HGDFSKVNWSLDTVYPVQRLKAKILQATKSSTSGHTLERRRTSFLEGTLKRGFKVGSMRKQKVEE 1840

  Fly  1975 PEVLTRLIPEDLIPLQT-VAE-WRQQILPKVHRDHLTEDHAKILFLQELSHFACFGSTFFVVKQQ 2037
            .:::...:.|:|...:| :|| |.:       ...:::..|.:.::..:|.:..:|||.|.| :.
 Frog  1841 EQMMEMWVKEELSAARTSIAEKWSR-------LQGMSQHQAMVKYMTIVSEWPGYGSTLFDV-EY 1897

  Fly  2038 NDDALPETLLIAINSTGFHMLDPTTKEILRSYEYSQLGIWSSGK-NHFHIRFGNMIGASKLLCST 2101
            .:...|..|.:.:::....:......:.|.:::|..:..:.:.: |.|.|    .:...::...|
 Frog  1898 KEGGFPNDLWLGVSAENVSVYKRGDAKPLETFQYEHIIFFGAPQPNTFKI----TVDDREMFFET 1958

  Fly  2102 TQGYKMDDLLASYV 2115
            ||..::..::.:|:
 Frog  1959 TQVGEITKIMRAYI 1972

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 307/690 (44%)
MYSc_Myo7 81..726 CDD:276832 293/660 (44%)
IQ 765..785 CDD:197470 6/19 (32%)
DUF4355 827..>887 CDD:290964 25/63 (40%)
MyTH4 1031..1239 CDD:295320 41/243 (17%)
B41 1248..1429 CDD:214604 47/222 (21%)
FERM_N 1248..>1288 CDD:286467 12/63 (19%)
FERM_B-lobe 1342..1429 CDD:271216 20/95 (21%)
PH-like 1454..1547 CDD:302622 19/93 (20%)
MyTH4 1674..1819 CDD:214535 45/179 (25%)
B41 1827..2032 CDD:214604 50/271 (18%)
FERM_N 1829..>1877 CDD:286467 12/50 (24%)
FERM_M 1936..2032 CDD:278785 24/154 (16%)
FERM_C2_MyoVII 2028..2121 CDD:270020 16/89 (18%)
myo10.2XP_031749628.1 MYSc_Myo10 21..669 CDD:276840 293/660 (44%)
IQ 729..751 CDD:197470 6/44 (14%)
MYO10_CC 836..880 CDD:407004 9/75 (12%)
MSCRAMM_ClfB <949..1095 CDD:411414 33/190 (17%)
PH-like 1115..>1147 CDD:418428 8/32 (25%)
PH2_MyoX 1150..1251 CDD:270108 25/117 (21%)
PH-like <1278..1322 CDD:418428 7/44 (16%)
PH3_MyoX-like 1316..1441 CDD:270109 32/164 (20%)
MyTH4 1524..1628 CDD:395633 31/110 (28%)
FERM_F1_Myosin-X 1632..1729 CDD:340726 25/104 (24%)
B41 1638..1893 CDD:214604 50/270 (19%)
FERM_C_MyoX 1889..1977 CDD:270023 16/89 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.