DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo28B1 and myo7b

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_002936659.2 Gene:myo7b / 100491953 -ID:- Length:2118 Species:Xenopus tropicalis


Alignment Length:2259 Identity:856/2259 - (37%)
Similarity:1262/2259 - (55%) Gaps:292/2259 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RKGEYVWVKPQNTTSEFAVPFGARIVRTEKTQTLVCDDRNKQFWVPAGDV--LKAMHITSQEDVE 70
            |:||:||:: .:::|:..||.||.:..:..|:|||.||..|:.|:.|.::  :..||.:....||
 Frog     5 RQGEHVWLE-ASSSSQSKVPIGAVVKNSHGTETLVVDDDGKEHWISARNISSVHPMHPSLAHGVE 68

  Fly    71 DMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPH 135
            |||.||:|.|..|:.|:..||.:..|||||||:|||:||||.||:|...::::|||:.:.|||||
 Frog    69 DMIRLGELNEAGIVHNIHIRYKENNIYTYTGSILVAVNPYQELPLYDTEQLEMYRNRRIGELPPH 133

  Fly   136 IFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKHSWIEQQIIEANPIMEA 200
            |||:.|..|..:||...:||.||||||||||||||||:||:||:.||:||||||||:||||||||
 Frog   134 IFALGDTCFFNMQRTNTDQCCVISGESGAGKTESTKLMLQFLASASGQHSWIEQQILEANPIMEA 198

  Fly   201 FGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLS 265
            ||||||:||||||||||||||.|:.:..|:||||:|:||||||:..||..|||||||||||.|:.
 Frog   199 FGNAKTIRNDNSSRFGKYIEIHFSNKHVIEGARIEQFLLEKSRVCRQSPGERNYHIFYCMLLGMG 263

  Fly   266 TAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAIL 330
            :.::::|.|  :|||.|.||..|.|....||.|.|.|:.||.|||:|.....|...|..:|||||
 Frog   264 SEQKKQLNL--ESPSDYKYLTMGNCTNCDGRDDHKAFSQIRTAMKILLLSEIEQQEIFKMLAAIL 326

  Fly   331 HLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAA 395
            |||||:|.|....||...::.::.:|..||.||.:..:.|...|:..||.|.||.|:..||...|
 Frog   327 HLGNLKFKAAMCGNLECCDVPESIHLSTVATLLEVDSAQLTNCLSNHTIIVRGESVSKPLSCTQA 391

  Fly   396 IEGRDAFVKSLYDGIFVRIVRRINETI-NKQVDQPMNSIGVLDIFGFENFDNNSFEQLCINYANE 459
            .:.||||||.:|..:|:.||.:||:.| ....:....|:|:|||||||:||.|||||||||:|||
 Frog   392 SDSRDAFVKGIYGRLFMWIVNKINKAIFTPDSENGRRSVGLLDIFGFEHFDTNSFEQLCINFANE 456

  Fly   460 NLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTL 524
            :||||||.||||:||:||..|.|.|:||:|.|||:.||:|.::|:|::||||||||||:|||.|:
 Frog   457 HLQQFFVRHIFKLEQEEYNAEQIPWEHIDFSDNQRTLDVIALRPLNIISLIDEESKFPQGTDATM 521

  Fly   525 LEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYL 589
            |.||:..|...::|:..|:...:.|||.||||:|.|...|||:||||..|.|:..::..|:|.:|
 Frog   522 LVKLNNVHSKTNVYIASKSVHDTKFGINHYAGIVYYETEGFLDKNRDLLSTDIMLMIHTSSNYFL 586

  Fly   590 VDIFPHE--------------------MPMDTAKKQPTLCVKFRNSLDMLMRTLSQAHPYFIRCI 634
            ..:|..|                    ...||.:..|||..:|:.||:.||:.|....|||||||
 Frog   587 KQVFQMEKITKSSGSVTYRHIINSYSQKTADTNRSLPTLGGQFKQSLEQLMKILESCQPYFIRCI 651

  Fly   635 KPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCD-- 697
            ||||:|:||.||:|||:|||:|||||||.|||:||||||:::..|.:|||:|:|...|..:.:  
 Frog   652 KPNEFKKPKMFDRELCIRQLQYSGMMETIRIRKAGYPIRYSFSEFFQRYRVLLPIQSPYRKKENF 716

  Fly   698 ---CRKLARQICEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVLFRR 759
               |..:|:.:    :....|.:.|||||||:|..|..||::|.:.:..|.:.||:.:|....|:
 Frog   717 REGCIDIAKSV----IGKHEDWKVGKTKLFLKDNHDTKLEVERDKAITASAIRIQKVVRGYKDRK 777

  Fly   760 YMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGY 824
            ...|.|||.|.:|..|:....|:.:|.|..||.||.|.|.::.:..::...|...|:||.|||||
 Frog   778 RFLRQREAAIKIQSAWKSYYCRKTFQKMLHGFQRLQAIIRSRPVQMQYKKKREVIIQLQGLSRGY 842

  Fly   825 LVRKDFQKK-------------LLERRKQNQLKKEELLKLAKMKEAEELLRLQQ-LKEQKEREQR 875
            |:||...|:             :|.|::..::|:.|.......:|||:...:|: |..|:|:|..
 Frog   843 LLRKKIAKRKNAVLVLQTYTRGMLARKEYRRMKRNEYPSQQDWEEAEKRKEMQKALLLQQEKENL 907

  Fly   876 EQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAP 940
            |..|                                           |....||        |..
 Frog   908 EMVE-------------------------------------------QVFGFLP--------AMD 921

  Fly   941 LPTRPASAVTRINTIPESPGTIDVESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVP 1005
            :.|.|.|            ..||:::           |..|||                      
 Frog   922 MDTSPFS------------DEIDLDT-----------LLYEPD---------------------- 941

  Fly  1006 NNIDTSDFSYLKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVV 1070
               ...::::.|:|||||.|.||..|.||.|::.||.||...|.:||.|:|..||||||:||:  
 Frog   942 ---KEEEYTFPKFAATYFQGSATDTHIRKALQQPLLYHEDKNDVLASLAVWKIILRFMGELPE-- 1001

  Fly  1071 SSPTLHVFDNENLMSDLASLL-----------NTSDSYK---PRL-------------FVRQSQ- 1107
              |.|:   ..|..|:.:|:|           |.:...|   |::             ..|.|: 
 Frog  1002 --PALY---TPNSSSERSSVLTQIYDTLTRKNNITAGIKDNVPKVNKKGKGKEISSMKLKRASKL 1061

  Fly  1108 -RRIPKPLASGEKEAQEFYQHWLNVPTSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRS 1171
             .::.:.|::||:...| ....::.|.|:|||||||.|:||::..:||||..||||||..|.:::
 Frog  1062 AGQVSRQLSNGEEIMLE-ESSIIDKPMSNLEKIHFIAGNGILRPEIRDEIYCQICKQLSGNNNKT 1125

  Fly  1172 SYSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQLQATP-SLQRLERTLVNGPRCQPPSLFEL 1235
            |.:|||:||:|||.|||||.:|..:|::|::  |:|:.... .::||.|||.||.|.:|||..||
 Frog  1126 SVARGWILLALCLGCFPPSDKFLRYLQNFIR--TSQIAYNAICIKRLNRTLQNGVRSEPPSWLEL 1188

  Fly  1236 HAIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGA 1300
            .||:|.....:.:.||.|....:|.|:|:.|||....:.|.:.|.|||||.:.:|:..|:..||.
 Frog  1189 QAIKGVGSFSVPVTLMTGHSMNIQTDSATNAREMCKVIAQKLQLKDTFGFSVYISVYNKVWSLGF 1253

  Fly  1301 GQEHVLDAISECEQ-------RQLDAPWKLYIRKEMFATWYDPSMDPKATQLIYKQILNGLKCGE 1358
            |.||::|.||:|||       ::..:||:|..|||:|..|:|.|.|..:|:|||.|::.||..||
 Frog  1254 GSEHLMDGISQCEQLAKEQGEQERHSPWRLNFRKEIFTPWHDSSTDSVSTELIYCQVIRGLCFGE 1318

  Fly  1359 YRCRSEKDIAMVCALACFVEYGPGEILRLKPSEITAFVPSDLLAPGE---RAIENWSRLIAATYE 1420
            |||..|:::|.:.....:::|  ||:|   ..:....|..|.:.|.:   :.:.:|..|:.....
 Frog  1319 YRCDKEQELAELMLKHHYIKY--GEVL---TDQHVESVMQDCVPPKQLETKQMSHWLSLLKERQA 1378

  Fly  1421 KSSYVKEEQNDLLLEAQKRAKEDICLFAHLSWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLF 1485
            .:.||||:...|      :.||....::.|.||:..|:.||..:..||.:..:..::.||...:.
 Frog  1379 VAQYVKEKHPAL------QVKEAFVEYSRLQWPLLFSKFFEASKFTGPSISRNHFIVAINWKEIN 1437

  Fly  1486 LIDETEQVLASCCFSEVLKVHVESDDKLH-----VMTFQHVNFVLQCSSAQDANEVINYMLDNLR 1545
            .:||.|:.|....|.|::.:..:..:|..     :.|.:...|||....:.:...::.|.||.|:
 Frog  1438 FLDEKEKRLLQLSFPELIGIRTKRAEKTFGQCCILNTLRGEEFVLTSQHSDEIAHLLLYFLDELK 1502

  Fly  1546 QRSSYGVALD-------------PVVEGDLEDCLVLNPGDLIEF----EAGVTGAQLMAGNAQDC 1593
            .||.|.|||.             ...:.|..|.|....||::..    |..:....:.|.|.:  
 Frog  1503 ARSHYAVALQDSSHTVKESLSSTKKAQTDEPDLLSFRSGDVLLLDRSPELQLRANWIFAKNER-- 1565

  Fly  1594 YRGCVNGQWGQFLAGNVRVLATLTKPSEKLQDIL------REGRF----------QEPPKPTPRA 1642
                 .|:.|.....::.::.||:.||.::..::      |:..|          ||..||    
 Frog  1566 -----TGKTGAVSLSSIHIIPTLSTPSSEILRLIVMSPEERKSEFYNALVEDFEKQEEVKP---- 1621

  Fly  1643 NYSRRRQHNISQLAESHFREPLDSDKAPLSK--------------FSPEPLKAPLLKAVVKVPPL 1693
                   :.:.:.:..|||.|   |...||:              :|.|||:.|||:.|.::..|
 Frog  1622 -------YTLEEFSLHHFRNP---DPESLSRAVLQRSRGKTHLWAYSREPLRQPLLRKVCEISDL 1676

  Fly  1694 FQQALVMHHHILKYMGDI--ARSNLPVN-TDLIFQPALQHPLLCDELYCQLMKQLSDNPSSESEK 1755
            ...|......|:|||||.  .:::.||. ||.||...::...|.||:|||::||::.|..|.|..
 Frog  1677 RDYACTAFTAIMKYMGDYPSKQTHSPVELTDQIFSGPIKEEALRDEIYCQILKQMTGNSKSYSVN 1741

  Fly  1756 RGWDLLYLATGLVAPSVLVMRELIILLRMR-ADALADACLKRLKRSLAQGQRKKAPHLIEVEGIQ 1819
            .||.||:|.|||..|:.|::..:...:..| .:.||.|.|:|:.|....|.||:.|||:|||.||
 Frog  1742 SGWQLLWLCTGLFPPTKLLLVHVKKFIENRQKEPLAKASLRRILRVQQYGARKQPPHLVEVEAIQ 1806

  Fly  1820 QRCLHIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLELKSPVGYSIFLKTGDRVYAMPEEEF 1884
            |....||||:|||:...|.||:.::|:..||..:|:.:|:|.|..|:|:|||.||:|.:..|:::
 Frog  1807 QMSTKIYHKVYFPNGKEETFEVGTNTKVRELCQNISSKLQLTSWEGFSLFLKIGDKVISQNEQDY 1871

  Fly  1885 VFDFITQLIYWLRQQR-TIRSISDGQYQLHFMRKLWLNNHPGEDLNGDMIFSYPQELHKYLKGYY 1948
            .:|.:.||..::|:.| |..:.:...:||:||||||:|..||:|:..|.||.|.||:.||::||.
 Frog  1872 FYDSLRQLNDFIRKTRPTAGTPAFASFQLYFMRKLWINVQPGKDIKADCIFHYHQEVPKYMRGYN 1936

  Fly  1949 PIDCEQASRLAILVYSADHD---VSLQRLPEVLTRLIPEDLIPLQTVAEWRQQILPKVHR-DHLT 2009
            ....|.|..||.|:|...::   ..|..|.:.:..|:||.|:.|.|..||::.|:...:: :..|
 Frog  1937 LCSVEDAVNLAGLMYKVQYNNDRTHLATLNKNVRDLVPEYLLRLSTPEEWKKNIIAAYNKHEAKT 2001

  Fly  2010 EDHAKILFLQELSHFACFGSTFFVVKQQNDDALPETLLIAINSTGFHMLDPTTKEILRSYEYSQL 2074
            .|.||:.||:::..:..|||.||.|||.::.:.|:.:|||||..|..:..|.|||:|.::.::::
 Frog  2002 VDEAKVAFLRQICRWPTFGSAFFEVKQSSEPSYPDIVLIAINKHGVSLFHPKTKELLITHPFNKI 2066

  Fly  2075 GIWSSGKNHFHIRFGNMIGASKLLCSTTQGYKMDDLLASYVKY-FNEHE 2122
            ..|:||..:|.:..|:::..:|:||.|:.||||||||.||:.| .::|:
 Frog  2067 SRWNSGNTYFQMTTGSLVRDNKILCETSLGYKMDDLLTSYIHYIMSKHQ 2115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 363/700 (52%)
MYSc_Myo7 81..726 CDD:276832 348/670 (52%)
IQ 765..785 CDD:197470 7/19 (37%)
DUF4355 827..>887 CDD:290964 17/73 (23%)
MyTH4 1031..1239 CDD:295320 92/237 (39%)
B41 1248..1429 CDD:214604 67/190 (35%)
FERM_N 1248..>1288 CDD:286467 16/39 (41%)
FERM_B-lobe 1342..1429 CDD:271216 27/89 (30%)
PH-like 1454..1547 CDD:302622 22/97 (23%)
MyTH4 1674..1819 CDD:214535 59/148 (40%)
B41 1827..2032 CDD:214604 78/209 (37%)
FERM_N 1829..>1877 CDD:286467 20/47 (43%)
FERM_M 1936..2032 CDD:278785 33/99 (33%)
FERM_C2_MyoVII 2028..2121 CDD:270020 39/93 (42%)
myo7bXP_002936659.2 MYSc_Myo7 79..744 CDD:276832 348/670 (52%)
IQ 759..779 CDD:197470 5/19 (26%)
MyTH4 964..1192 CDD:214535 92/237 (39%)
B41 1199..1412 CDD:214604 74/223 (33%)
FERM1_F1_Myosin-VII 1199..1294 CDD:340612 36/94 (38%)
FERM_C1_MyoVII 1406..1504 CDD:270019 22/97 (23%)
SH3 1505..1570 CDD:388381 14/71 (20%)
MyTH4 1657..1806 CDD:214535 59/148 (40%)
FERM2_F1_Myosin-VII 1811..1907 CDD:340613 38/95 (40%)
B41 1814..2024 CDD:214604 78/209 (37%)
FERM_C2_MyoVII 2020..2112 CDD:270020 39/91 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D21221at33208
OrthoFinder 1 1.000 - - FOG0001409
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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