DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and myo9aa

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_021333664.1 Gene:myo9aa / 100006612 ZFINID:ZDB-GENE-080424-5 Length:2590 Species:Danio rerio


Alignment Length:2459 Identity:585/2459 - (23%)
Similarity:911/2459 - (37%) Gaps:823/2459 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NKQFWVPAGDVLKAMHITS------QEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLV 105
            |.|.|:...:..:.|....      .:|.:|:..|.||.|.|:|.||::|:.::.||||.||:|:
Zfish   121 NLQMWLQVTEERRRMVERGFLPQPLPKDFDDLCNLPDLNEKTLLDNLRSRFKQEKIYTYVGSILI 185

  Fly   106 AINPYQILPIYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTEST 170
            .|||::.||||..:.:::|.|..|.:|.|||:|::|.|:..:.:.::|||:|||||||:|||:||
Zfish   186 VINPFKFLPIYNPKYVKMYDNHQLGKLEPHIYAVADVAYHAMLQSRQNQCIVISGESGSGKTQST 250

  Fly   171 KLILQYLAAIS--GKHSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGAR 233
            ..::.:|.|:|  |..|.:||.|:.|.|::||||||||..|:|||||||:|::.:...|.::||.
Zfish   251 NFLIHHLTALSQKGFASGVEQIILGAGPVLEAFGNAKTAHNNNSSRFGKFIQVNYQESGTVRGAY 315

  Fly   234 IQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQ----------- 287
            :::|||||||:|:|..:|||||:||.:|||  |:|.||.....:.|.:||||.|           
Zfish   316 VEKYLLEKSRLVYQEHNERNYHVFYYLLAG--TSEEERTAFHLKKPEEYHYLNQMTKKPHRPHWG 378

  Fly   288 -------GGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANL 345
                   ..|||:.|.....||..::.||:::.|.|.....|.|||:|||||||:|: ..::...
Zfish   379 NYYENEPQDCFTVEGEDLKHDFERLQLAMEMVGFLPTTRKQIFSLLSAILHLGNIRY-KKKIYRD 442

  Fly   346 ATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGI 410
            .:.:|.:...|..|::||.:....|..|||.|.....||.:........|...||:..||||..:
Zfish   443 DSIDICNPEVLPVVSELLEVKEEMLFEALTTRKTVTVGEKLIVPYKLAEAGTVRDSMAKSLYSAL 507

  Fly   411 FVRIVRRINETINKQVD----QPMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFK 471
            |..||.|||..:..|.|    ..:.|||||||||||:::||||||.|||:|||.||.:|..||||
Zfish   508 FDWIVFRINHALLNQRDLEESAKILSIGVLDIFGFEDYENNSFEQFCINFANERLQHYFNQHIFK 572

  Fly   472 MEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLEKLHVQHGNRS 536
            :||:||:.|.|.|.:|::.||...:.||..||..|:.|:|||..||:.|:||||:|...||...|
Zfish   573 LEQEEYRAEGITWHNIDYIDNTSCITLISKKPTALLHLLDEECNFPQATNQTLLDKFKRQHEGNS 637

  Fly   537 IYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYL------------ 589
             |::........|.|:||||.|.|....|.|||.|....|:..|::.|.|.::            
Zfish   638 -YIEFPAVMEPAFIIKHYAGKVKYGVKDFREKNTDHMRPDIVALLKSSKNAFICGLIGIDPVATF 701

  Fly   590 --------------------------------------VDIF----------------------- 593
                                                  ||.|                       
Zfish   702 RWAVLRAYFRAMVAFRDAGKRHVEKRSGHDAAAPAVKSVDSFSFLHHPVHQRSLEILQRCKEEKY 766

  Fly   594 -------------PHEMPMDT-------------------------------------------- 601
                         ||..|..|                                            
Zfish   767 IQHACFSGSPPLSPHWSPSSTPPAHCTHSFFDDSGLTIGLLDGGVNRRNPRTPLSDLQGSNAINQ 831

  Fly   602 ----------------------------------------------------------------- 601
                                                                             
Zfish   832 REGWNGRPGRQNRLSSFGSFSEEEGIFINSTSSKLLERAHGILMRNKNYKMKPSLPKHLLDVKSL 896

  Fly   602 ---------------------AKKQPTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNF 645
                                 .||.|::..:|:.||:.||.||.|:.|||::||:.|..|.|..|
Zfish   897 KYLSNLTLQDRITKSLLHLHKKKKPPSISAQFQASLNKLMETLGQSQPYFVKCIRSNSEKLPLRF 961

  Fly   646 DKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCDCRKLARQICEVAL 710
            :..|.:|||||:||:||.|||::||.|::.::.|...:.:|:|...  .|.....:.:.:.:|.|
Zfish   962 NDSLVLRQLRYTGMLETVRIRQSGYSIKYTFQDFARHFHVLLPEGS--NQASQEAIRQYLQQVDL 1024

  Fly   711 PADSDRQYGKTKLFLRDEDDASLELQRSQ-----LMLKSIVTIQRGIRRVLFRRYMKRYRE---- 766
            ..:. .|.|:|.:|||:     :|.||.|     .:|..||.:||..|.:|.|:...|.|:    
Zfish  1025 TPEG-FQVGRTMVFLRE-----IERQRLQDLLHKEVLSRIVYLQRRFRALLERKNFLRVRQAACQ 1083

  Fly   767 --------------------------AIITVQRYWRGRLQRRKYQVMRQG---------FHRLGA 796
                                      |::.:|..|||..:||:..:.|:.         .:|...
Zfish  1084 IQNWWRSCQSLQRDSQLEYDMRVQEGAVVCIQSAWRGFRERRRLLLWREASVLIQRTWRLYRQRR 1148

  Fly   797 CIAAQQLTTKFTMVRCR---------TIKLQALSRGYLVRKDFQKKLLERRKQNQLKKEELLKLA 852
              ||.|:.|.:...|.|         ||:|||:.||||.|:.|::...:|.|...|...:...|.
Zfish  1149 --AALQIQTAWRRHRARELFLRQRDATIRLQAVGRGYLARQRFRELQKQRLKITHLPNGKASLLT 1211

  Fly   853 KMKEAEEL-LRLQQLKEQKEREQREQQEKRLQEE-------QRLKAEAAARNALAMAAVQQKRRT 909
            :..:.|:: |....|::..|.:.|.:|......|       :.::.|.....|.|..:.:...|.
Zfish  1212 EEDKLEDMGLDASMLEDSFEEQDRSKQALSSAVEASGAGVLEEMEVEMMEGMAPAQPSPEVTIRE 1276

  Fly   910 KPVKQEAPKAPTL------------QARNSLPPPPTTLIVAAPLPTRPAS----AVTRINTIPES 958
            :|...|.|...|.            ||:.||    ..|.|.:...|.|:.    ::..::.|..:
Zfish  1277 RPRTLEDPNQRTRAKRESRRMRELEQAKFSL----ELLKVRSTGGTSPSDERRWSMELVSEIAHT 1337

  Fly   959 P-GTIDVESSKQM-----VDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVP--NNI---DTSD 1012
            | ||.|.:|||..     :||.|:  :..|.|....|.:         |.|||  :|:   |||.
Zfish  1338 PQGTPDSQSSKGSFELLNIDDYFK--DKAPCAEPEDLGS---------PSSVPDQHNVLPSDTST 1391

  Fly  1013 FSYLKYAATYFGGGATAQHERKP--LKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTL 1075
            ...|          :....:.||  ::.||.....|..|.:|..|..| ...:...||.:|.|:.
Zfish  1392 PDIL----------SKPDDQSKPPRMQYSLPTFYTPPSESSSLVIKST-TNSVTPCPDGLSKPSK 1445

  Fly  1076 HVFDNEN------LMSDLASLLNTSDSYKPRLFVRQSQRRIPKPLASGEKEAQEFYQHWLNVPTS 1134
            ...::..      :.....:|||.:| .|| |.|:.|..:..:|.:..:......|.        
Zfish  1446 DKKESTRRPMVVVISMQKETLLNEAD-VKP-LEVKDSAAQTSEPPSPAQPSTDSSYV-------- 1500

  Fly  1135 HLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRSSYSRGWLLLSLCLSCFPPSKEFEPHLRS 1199
             |||:..:       |..::|              |..:.|.           ...||....:| 
Zfish  1501 -LEKLEKL-------NEEKEE--------------RQKHQRQ-----------QNEKEMMEQIR- 1531

  Fly  1200 FMKQGTAQLQATPSLQRLERTLVNGPRCQPPSLFELHAIRGRHPLRLDIHLMDGQQRRLQVDAAS 1264
                     |.|..|:...|.||...|                             .:|:...|.
Zfish  1532 ---------QQTHILEEQRRNLVQNER-----------------------------EKLEKQRAE 1558

  Fly  1265 TAR--EAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGAGQEHVLDAISECEQRQLD-APWKLYIR 1326
            |.|  |...|...| |.||            :..|:...:.   |..|:...|:.| ||  |.:|
Zfish  1559 TLRRIEQSRQESSG-GRTD------------RPAPIAQPEP---DLTSQRPAREKDGAP--LILR 1605

  Fly  1327 KEMFATWYDPSMDPKATQLIYK----QILNGLKCGEYRCRSEK-------DIAMVCALACFVEYG 1380
            ..           ||..|.:.:    ::....:..|.|.|..|       :|:|        ...
Zfish  1606 DR-----------PKDAQNLAEGWAPKLTLESRGDEARSRINKKPSNQNVNISM--------SER 1651

  Fly  1381 PGEILRLKPSEITAFVPSDLLAPGERAIENWSRL--IAATYEKSSYVKEEQNDLLLEAQKRAKED 1443
            ||.|.         |.|...:|        :|:|  ..|..||:   ...||::.|...|..|.:
Zfish  1652 PGNIF---------FSPKTKIA--------YSKLNKDLANQEKT---PGAQNEVSLLGYKSTKTE 1696

  Fly  1444 ICLFAHLSWPMRHSRLFEVVRK-------EGPKLQSDELMLGINSAGLFL--IDETEQVLASCCF 1499
            :....|....|..:|...:.|.       |..:.:.||..|   .||..|  .|..|..:.:|  
Zfish  1697 VGRPGHKKARMARTRSDFLTRSSSTQGEGESEEEEYDETPL---YAGTPLPKQDSEESAVEAC-- 1756

  Fly  1500 SEVLKVHVESDDKLHVMTFQHVNFVLQCSSAQDANEVINYMLDNLRQRSSYGVALDPVVEGDLED 1564
                  |.:|:             :|..::.:..|.                             
Zfish  1757 ------HSDSE-------------MLTTAAEEQKNR----------------------------- 1773

  Fly  1565 CLVLNPGDLIEF--------EAGVTGAQLMAGNAQD-----------CYRGCVNGQWGQFLAGNV 1610
            |..|..|:|.:.        :..|.|.....|.|::           |....:.|.:.:      
Zfish  1774 CKTLPSGELGKHDTRKNSHGDGRVRGKMRFWGKAKNAEKKSSRERLLCGSDTLEGDYTE------ 1832

  Fly  1611 RVLATLTKPS--EKLQ-----DILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFREPLD--- 1665
               |||....  |:|.     |:..:..|:|..:|:|:.  .|||...||.:|    .||:.   
Zfish  1833 ---ATLLMEEGVERLSPPHSPDLTLQREFKENKEPSPKV--KRRRSVKISSVA----LEPVQWQN 1888

  Fly  1666 ---------SDKAPLSKFSPEPLKAPLLKAVVKVPPLFQQALVMHHHILKYMGDIARSNLPVNTD 1721
                     ||...::.|        |:|.:..:                   |..........|
Zfish  1889 DALQILTCTSDYKSMNDF--------LMKKITDL-------------------DTEDGKKDTMVD 1926

  Fly  1722 LIFQPALQH-----------PLLCD--------ELYCQLMKQLSDNPSSESEKRGWDLLYLATGL 1767
            ::|:.||:.           .|..|        :||. |.:|:.:. :...|:|.|.        
Zfish  1927 VVFKKALKEFRVNIFNSYSTALAMDDGKSIRYKDLYA-LFEQILEK-NMRQEQRDWS-------- 1981

  Fly  1768 VAPSVLVMRELIILLR--MRADALADACLKRLKRSLAQGQRKKAPHLIEVEG------------- 1817
            .:|..:.:....:.|.  |......|:.|.:..:...:.:|||...::|...             
Zfish  1982 ESPVKVWVNTFKVFLDEFMTEHKPLDSSLGKAPKPDRKKRRKKDTDVVEEHNGHIFKSTQYSIPT 2046

  Fly  1818 ----------------IQQRCLHIYH------------KIYFPDDTVEAFEIE-----SHTRGAE 1849
                            :.:.|.:..|            |.|.|:.:...|.:|     :..|...
Zfish  2047 YCEYCSSLIWMMDKACVCKLCRYACHRKCCQKMTTKCSKKYDPELSSRQFGVELSRLTNDERTVP 2111

  Fly  1850 LIAD-IAQRLELKSPVGYSIFLKTGDRVYAMPEEEFVFDFITQLIYWLRQ--QRTIRSISDGQYQ 1911
            |:.: :...:|:.......|:.|:|.               |..|..|:|  ...:..::...|.
Zfish  2112 LVVEKLVNYIEMHGLYTEGIYRKSGS---------------TNKIKELKQGLDTDVNGVNLDDYN 2161

  Fly  1912 LHFMR---KLWLNNHPGEDLNGDMIFSYPQEL---------HKYLKGYYPIDCEQASRLAILVYS 1964
            ::.:.   |.||.:.|    |..|.|...:|.         .:.::|.|.: .:|.||       
Zfish  2162 INVIASVFKQWLRDLP----NPLMTFELYEEFLRAMGLQDKKEVIRGVYSV-IDQLSR------- 2214

  Fly  1965 ADHDVSLQRLPEVLTRL------------------------IPEDLIPLQTVAE 1994
             .|..:|:||...|.|:                        .|:.:.||::|.:
Zfish  2215 -THLNTLERLIFHLVRIALQEETNRMSANALAIVFAPCILRCPDTIDPLRSVQD 2267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 292/920 (32%)
MYSc_Myo7 81..726 CDD:276832 283/884 (32%)
IQ 765..785 CDD:197470 8/49 (16%)
DUF4355 827..>887 CDD:290964 13/67 (19%)
MyTH4 1031..1239 CDD:295320 41/215 (19%)
B41 1248..1429 CDD:214604 39/196 (20%)
FERM_N 1248..>1288 CDD:286467 10/41 (24%)
FERM_B-lobe 1342..1429 CDD:271216 18/99 (18%)
PH-like 1454..1547 CDD:302622 17/101 (17%)
MyTH4 1674..1819 CDD:214535 26/194 (13%)
B41 1827..2032 CDD:214604 40/224 (18%)
FERM_N 1829..>1877 CDD:286467 10/53 (19%)
FERM_M 1936..2032 CDD:278785 16/92 (17%)
FERM_C2_MyoVII 2028..2121 CDD:270020
myo9aaXP_021333664.1 UBQ 7..111 CDD:320785
MYSc_Myo9 161..1039 CDD:276836 283/884 (32%)
IQ 1145..1166 CDD:197470 7/22 (32%)
Activator_LAG-3 <1464..1574 CDD:331748 35/192 (18%)
C1_1 2035..2083 CDD:278556 2/47 (4%)
RhoGAP 2096..2281 CDD:295372 36/200 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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