DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP1029 and Rnpepl1

DIOPT Version :10

Sequence 1:NP_652618.1 Gene:SP1029 / 53473 FlyBaseID:FBgn0263236 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_001258106.1 Gene:Rnpepl1 / 684035 RGDID:1595210 Length:724 Species:Rattus norvegicus


Alignment Length:736 Identity:164/736 - (22%)
Similarity:261/736 - (35%) Gaps:215/736 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 QKYHLRILTL-LE-NPEDLRFSGSVKILIEALENTKN---------VTLHSKNL----TIDESQI 90
            |.:.||.|.| || .||....:|.:.:.:.||.....         :.|||.:.    ...||..
  Rat    37 QLFRLRHLQLGLELRPEARELAGCLVLELCALRPAPRALVLDAHPALRLHSVSFRRASATSESPC 101

  Fly    91 TLR-QIGGEG------------KKENCVSSTAVNPSHDFYILNTCQELLAGNTYELYMPFAADLN 142
            |.. ...|.|            :...|..:..::|..|:           |::..:.:|.....:
  Rat   102 TFAFPAPGSGPPLPAFADAPGAESAGCPLAFRLDPFTDY-----------GSSLTITLPPEVQAH 155

  Fly   143 RQLEGYYRSSYKDPVA------NLT----KWISVTQFEPASARLAFPCFDEPDFKAPFVVTLGYH 197
            :..:...|.:..|..|      .||    |....||......|..|||||.|..|.         
  Rat   156 QPFQVIVRYTSTDAPAIWWLDPELTYGNAKPFVFTQGHSVCNRSFFPCFDTPAVKC--------- 211

  Fly   198 KKYTAISNMPE-KETKPHETLADYIWCE----FQESVPMSTYLVAYSVNDFSHKPSTL-PNSALF 256
             .|:|:...|. .:.....|.:.|:..|    |....|:..||||....|.  ||:.: |.|   
  Rat   212 -TYSAVVKAPSGVQVLMSATQSAYVEEEGLYHFHMEHPVPAYLVALVAGDL--KPADIGPRS--- 270

  Fly   257 RTWARP-----------NAIDQCDYAAQ--FGPKVLQYYEQFFGIKFPLPKIDQIAVPDFSAGAM 308
            |.||.|           .|::|...||:  :||.:...|:..|     ||       |.|...||
  Rat   271 RVWAEPCLLPTATSKLSGAVEQWLSAAERLYGPYMWGRYDIVF-----LP-------PSFPIVAM 323

  Fly   309 ENWGLVTYREIALLYSAAHSSLADKQRVASVVAHELAHQWFGNLVTMKWWTDLWLNEGFATYV-A 372
            || ..:|:...::|.|       |:..|..|: ||:||.||||.||...|.::||:||.|||. .
  Rat   324 EN-PCLTFIISSILES-------DEFLVIDVI-HEVAHSWFGNAVTNATWEEMWLSEGLATYAQR 379

  Fly   373 SLGVENINPEWRSMEQESLSNLLTIFRRDALE-------SSHPISRPIQMVSE----ISESFDQI 426
            .:..|.....:..:|        |.||.|||.       ...|:|: :|:..|    .|...:..
  Rat   380 RITTETYGAAFTCLE--------TAFRLDALHRQMRLLGEDSPVSK-LQVKLEPGVNPSHLMNLF 435

  Fly   427 SYQKGSTVLRMMHLFLGE-ESFRSGLQAYLQKFSYKNAEQDNLWESLTQAAHKYRSLPKSYDIKS 490
            :|:||...:..:....|: :.|...|:||::|:.:.:....:|.:|......:.:.  :|.|.: 
  Rat   436 TYEKGYCFVYYLSQLCGDPQRFDDFLRAYVEKYKFTSVVAQDLLDSFLSFFPELKE--QSVDCR- 497

  Fly   491 IMDSWTLQTGYPVINVTRDYAARTAKLNQERYLLNTQVARAYRGGCWWVPLSYTTQAVQDFNNTA 555
                                    |.|..||:|                            |.|.
  Rat   498 ------------------------AGLEFERWL----------------------------NATG 510

  Fly   556 PKAWMECGKNGESLPKTIQDLPGPDQWVIFNTQLSTLYKVNYDAQNWK-----LLIETLTNGD-- 613
            |.........|.||.:.::.|  ...|.....:.:.......|...|:     |.::.|.:|.  
  Rat   511 PPLAEPDLSQGSSLTRPVEAL--FQLWTAEPLEQAAASASAIDISKWRTFQTALFLDRLLDGSPL 573

  Fly   614 -FERIHVINRAQLIDDALYLAWTGEQDYEIAMRLIEYLQREREYLPWKSAFENLKRVGRIVRQTP 677
             .|.:..:::.       |.:.....:.||.:|.::.:.| .:|.|      :|.||.|      
  Rat   574 PQEVVMSLSKC-------YSSLLDSMNTEIRIRWLQIVVR-NDYYP------DLHRVRR------ 618

  Fly   678 DFEFFKRYMKKL-ILPIYEHL 697
               |.:..|.:: .:|:||.|
  Rat   619 ---FLENQMSRMYTIPLYEDL 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP1029NP_652618.1 M1_APN-Q_like 42..497 CDD:341064 127/524 (24%)
ERAP1_C 582..910 CDD:463368 24/125 (19%)
Rnpepl1NP_001258106.1 M1_LTA4H 30..507 CDD:341062 133/580 (23%)
Leuk-A4-hydro_C 555..668 CDD:462686 22/105 (21%)

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