DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SP1029 and Trhde

DIOPT Version :10

Sequence 1:NP_652618.1 Gene:SP1029 / 53473 FlyBaseID:FBgn0263236 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_001102461.1 Gene:Trhde / 366894 RGDID:728895 Length:1066 Species:Rattus norvegicus


Alignment Length:915 Identity:292/915 - (31%)
Similarity:471/915 - (51%) Gaps:77/915 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RLPTSLRPQKYHLRILTLLENPEDLRFSGSVKILIEALENTKNVTLHSKNLTIDESQITLRQIGG 97
            ||...|:|..|:|.:...:||   ..|||.|.:.|.....|:.|.||:..:.:::.|:...:..|
  Rat   182 RLSGHLKPLHYNLMLTAFMEN---FTFSGEVNVEIACQNATRYVVLHASRVAVEKVQVAEDRAFG 243

  Fly    98 EGKKENCVSSTAVNPSHDFYILNTCQELL--------AGNTYELYMPFAADLNRQLEGYYRSSYK 154
                       || |...|::....|.|:        |...|.|.:.:.|.:..:|.|::|||| 
  Rat   244 -----------AV-PVAGFFLYPQTQVLVVVLNRTLDAQRHYNLKIIYNALIENELLGFFRSSY- 295

  Fly   155 DPVANLTKWISVTQFEPASARLAFPCFDEPDFKAPFVVTLGYHKKYTAISNMPEKETKPHETLAD 219
             .:....:::.||||.|..||.||||||||.:||.|.:::.:...|.::|||| .||...|. ..
  Rat   296 -VIHGERRFLGVTQFSPTHARKAFPCFDEPIYKATFKISIKHQATYLSLSNMP-VETSVFEE-DG 357

  Fly   220 YIWCEFQESVPMSTYLVAYSVNDFSHKPSTLPNSALFRTWARPNAI--DQCDYAAQFGPKVLQYY 282
            ::...|.::..||||.:|:::.:|:::.:|..:..:.|.:|||:||  ...|||.....:::::|
  Rat   358 WVTDHFSQTPLMSTYYLAWAICNFTYRETTTKSGVVVRLYARPDAIRRGSGDYALHITKRLIEFY 422

  Fly   283 EQFFGIKFPLPKIDQIAVPDFSAGAMENWGLVTYREIALLYSAAHSSLADKQRVASVVAHELAHQ 347
            |.:|.:.:.|||:|.:|||.....|||||||..:.|..:|...:.||::....|..|:.||:.||
  Rat   423 EDYFKVPYSLPKLDLLAVPKHPYAAMENWGLSIFVEQRILLDPSVSSISYLLDVTMVIVHEICHQ 487

  Fly   348 WFGNLVTMKWWTDLWLNEGFATYVASLGVENINPEWRSMEQESLSNLL-TIFRRDALESSHPISR 411
            |||:|||..||.|:||.||||.|...:|.:.:.|.|...:|..|:::| .:...|.|.||||:|:
  Rat   488 WFGDLVTPVWWEDVWLKEGFAHYFEFVGTDYLYPSWNMEKQRFLTDVLHEVMLLDGLASSHPVSQ 552

  Fly   412 PIQMVSEISESFDQISYQKGSTVLRMMHLFLGEESFRSGLQAYLQKFSYKNAEQDNLWESLTQAA 476
            .:...::|.:.||.|:|:||:.::||:..|:|...|:.|||.||....|.||.:::||.:|::|.
  Rat   553 EVLRATDIDKVFDWIAYKKGAALIRMLANFMGHSVFQRGLQDYLTIHKYGNAARNDLWNTLSEAL 617

  Fly   477 HKYRSLPKSYDIKSIMDSWTLQTGYPVINVTRDYAARTAKLNQERYLLNTQVARAYRGGC----- 536
            .:.   .|..:|:.:||.||||.|||||.:..:..|       |..:|.||....|..|.     
  Rat   618 KRN---GKYVNIQEVMDQWTLQMGYPVITILGNMTA-------ENRILITQQHFIYDIGAKTKAL 672

  Fly   537 --------WWVPLSYTTQAVQDFNNTAPKAWMECGKNGESLPKTIQDLPGPDQWVIFNTQLSTLY 593
                    |.:||   |..|.:.::.:.:|.:......|....|..|   ...|::.|...:..:
  Rat   673 QLQNSSYLWQIPL---TIVVGNRSHVSSEAIIWVSNKSEHHRITYLD---KGSWILGNINQTGYF 731

  Fly   594 KVNYDAQNWKLLIETLTNGDFERIHVINRAQLIDDALYLAWTGEQDYEIAMRLIEYLQREREYLP 658
            :||||.:||:|||:.|.. :.|.:.|.|||.|||||..||..|.....|.:.:|.||..|:::||
  Rat   732 RVNYDLRNWRLLIDQLIR-NHEVLSVSNRAGLIDDAFSLARAGYLPQNIPLEIIRYLSEEKDFLP 795

  Fly   659 WKSAFENLKRVGRIVRQTPDFEFFKRYMKKLILPIYEHLNGINDTFS-----AIPQQDQVLLKTM 718
            |.:|...|..:.:::.:..::..|..|:.|.:...|..|....:.|:     |..|.::  |:..
  Rat   796 WHAASRALYPLDKLLDRMENYNIFNEYILKQVATTYSKLGWPKNNFNGSVVQASYQHEE--LRRE 858

  Fly   719 VVNWACQYQVGDCVPQALAYYRNWRAEANPDEKNPVPINVRSTVYCTSIKHGSDSDWEFLWTRYK 783
            |:..||.:....|..||.....:|.:    ..:|.:|:|||..||||.:....:..|||:|.::.
  Rat   859 VIMLACSFGNKHCHQQASTLISDWIS----SNRNRIPLNVRDIVYCTGVSLLDEDVWEFIWMKFH 919

  Fly   784 KSNVAAEKRTILTALGCSREVWLLQRYLELTFDPKEAIRKQDSMWAFQAVAFNEVGFLLAKKYFM 848
            .:...:||:.:|.||.||.:..||.|.|.|:.: .|.:..||::.....||.|..|..||.|:|.
  Rat   920 STTAVSEKKILLEALTCSDDRNLLSRLLNLSLN-SEVVLDQDAIDVIIHVARNPHGRDLAWKFFR 983

  Fly   849 DNVDFIYKFYHPLTKDMSRLLSPLSEQVITLSDFNEFKDFVNNSRQSLKGLEQA-IQQTLEIMLT 912
            |....:...|.......|:|:|.::|.:.|..:..|.|:|:    :|..|:..| ..:.:|.:..
  Rat   984 DKWKILNTRYGEALFMNSKLISGVTEFLNTEGELKELKNFM----KSYDGVASASFSRAVETVEA 1044

  Fly   913 NVQWK 917
            ||:||
  Rat  1045 NVRWK 1049

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP1029NP_652618.1 M1_APN-Q_like 42..497 CDD:341064 159/465 (34%)
ERAP1_C 582..910 CDD:463368 101/333 (30%)
TrhdeNP_001102461.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..177
M1_APN-Q_like 190..635 CDD:341064 159/466 (34%)
ERAP1_C 720..1044 CDD:463368 101/335 (30%)
Blue background indicates that the domain is not in the aligned region.

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