DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP1029 and Lta4h

DIOPT Version :10

Sequence 1:NP_652618.1 Gene:SP1029 / 53473 FlyBaseID:FBgn0263236 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_001025202.1 Gene:Lta4h / 299732 RGDID:1311333 Length:611 Species:Rattus norvegicus


Alignment Length:593 Identity:139/593 - (23%)
Similarity:232/593 - (39%) Gaps:139/593 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PTSL-RPQKYHLRILTLLENPEDLRFSGSVKILIEALENTKNVTLHS-----KNLTIDESQITLR 93
            |.|: |.|..|||.              ||.....||..|..:|:.|     ::||:|...:|:.
  Rat    13 PASVCRTQHLHLRC--------------SVDFARRALTGTAALTVQSQEDNLRSLTLDTKDLTIE 63

  Fly    94 QIGGEGKKENCVSSTAVNPSHDFYILNTCQELLAGNTYELYMPFAADLNRQ--LEGYYRSSYKDP 156
            ::             .:|.....|.|...|. ..|:..|:.:|.|...|::  :|..:.:|   |
  Rat    64 KV-------------VINGQEVKYTLGESQG-YKGSPMEISLPIALSKNQEVVIEISFETS---P 111

  Fly   157 VANLTKWIS------------VTQFEPASARLAFPCFDEPDFKAPFVVTLGYHKKYTAI-SNMPE 208
            .::..:|::            .:|.:....|...||.|.|..|..:...:...|:..|: |.:.:
  Rat   112 KSSALQWLTPEQTSGKQHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIRD 176

  Fly   209 KETKPHETLADYIWCEFQESVPMSTYLVAYSVNDFSHK---PSTLPNSALFRTWARPNAIDQCDY 270
            .|....|..:..|: .|.:.||:..||:|..|.....:   |.||       .|:....:::..|
  Rat   177 GEAPDPEDPSRKIY-RFNQRVPIPCYLIALVVGALESRQIGPRTL-------VWSEKEQVEKSAY 233

  Fly   271 AAQFGPKVLQYYEQFFGIKFPLPKIDQIAV-PDFSAGAMENWGLVTYREIALLYSAAHSSLADKQ 334
            .......:|:..|...| .:...:.|.:.: |.|..|.|||         ..|.....:.||..:
  Rat   234 EFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMEN---------PCLTFVTPTLLAGDK 288

  Fly   335 RVASVVAHELAHQWFGNLVTMKWWTDLWLNEGFATYVA----------------SLGVENINPEW 383
            .:::|:|||::|.|.|||||.|.|...|||||...|:.                :||      .|
  Rat   289 SLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFHALG------GW 347

  Fly   384 RSMEQESLSNLLTIFRRDALESSHPISRPIQMVSEISE--SFDQISYQKGSTVLRMMHLFL-GEE 445
                 ..|.|.:..|     ..|||.::.:..:.::..  ::..|.|:||..:|..:...| |.|
  Rat   348 -----GELQNTIKTF-----GESHPFTKLVVDLKDVDPDVAYSSIPYEKGFALLFYLEQLLGGPE 402

  Fly   446 SFRSGLQAYLQKFSYKNAEQDNLWESLTQAAHKYRSLPKSYDIKSIMD--SWTLQTGYPVINVTR 508
            .|...|:||::||||::...|: |:|...|..|     ...|:.:.:|  :|....|.|.:    
  Rat   403 VFLGFLKAYVEKFSYQSVTTDD-WKSFLYAHFK-----DKVDLLNQVDWNAWLYAPGLPPV---- 457

  Fly   509 DYAARTAKLNQERYLLNTQVARAYRGGCWWVPLSYTTQAVQDFNNTAPKAWMECGKN--GESLPK 571
                   |.|.:..|.|..:|.:.|    ||     |...:|.|:.:.:...:...:  .|.|.:
  Rat   458 -------KPNYDVTLTNACIALSQR----WV-----TAKEEDLNSFSIEDLKDLSSHQLNEFLAQ 506

  Fly   572 TIQDLPGP 579
            .:|..|.|
  Rat   507 VLQKAPLP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP1029NP_652618.1 M1_APN-Q_like 42..497 CDD:341064 117/499 (23%)
ERAP1_C 582..910 CDD:463368
Lta4hNP_001025202.1 leuko_A4_hydro 6..608 CDD:274120 139/593 (23%)
Blue background indicates that the domain is not in the aligned region.

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