DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP1029 and Lta4h

DIOPT Version :10

Sequence 1:NP_652618.1 Gene:SP1029 / 53473 FlyBaseID:FBgn0263236 Length:932 Species:Drosophila melanogaster
Sequence 2:NP_032543.2 Gene:Lta4h / 16993 MGIID:96836 Length:611 Species:Mus musculus


Alignment Length:612 Identity:143/612 - (23%)
Similarity:236/612 - (38%) Gaps:177/612 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PTSL-RPQKYHLRI------LTLLENPEDLRFSGSVKILIEAL-ENTKNVTLHSKNLTIDESQIT 91
            |.|: |.|..|||.      .||         :|:..:.:::. ||.:::||.:|:|||::..|.
Mouse    13 PASVCRTQHLHLRCSVDFARRTL---------TGTAALTVQSQEENLRSLTLDTKDLTIEKVVIN 68

  Fly    92 LRQIGGEGKKENCVSSTAVNPSHDFYILNTCQELLAGNTYELYMPFAADLNRQ--LEGYYRSSYK 154
                |.|.|                |.|...|. ..|:..|:.:|.|...|::  :|..:.:|  
Mouse    69 ----GQEVK----------------YTLGESQG-YKGSPMEISLPIALSKNQEIVIEISFETS-- 110

  Fly   155 DPVANLTKWIS------------VTQFEPASARLAFPCFDEPDFKAPFVVTLGYHKKYTAI-SNM 206
             |.::..:|::            .:|.:....|...||.|.|..|..:...:...|:..|: |.:
Mouse   111 -PKSSALQWLTPEQTSGKQHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAI 174

  Fly   207 PEKETKPHETLADYIWCEFQESVPMSTYLVAYSVNDFSHK---PSTLPNSALFRTWARPNAIDQC 268
            .:.|....|..:..|: .|.:.||:..||:|..|.....:   |.||       .|:....:::.
Mouse   175 RDGEAPDPEDPSRKIY-RFNQRVPIPCYLIALVVGALESRQIGPRTL-------VWSEKEQVEKS 231

  Fly   269 DYAAQF--------------GPKVLQYYEQFFGIKFPLPKIDQIAVPDFSAGAMENWGLVTYREI 319
              |.:|              ||.|...|:...     ||       |.|..|.|||         
Mouse   232 --ANEFSETESMLKIAEDLGGPYVWGQYDLLV-----LP-------PSFPYGGMEN--------- 273

  Fly   320 ALLYSAAHSSLADKQRVASVVAHELAHQWFGNLVTMKWWTDLWLNEGFATYVA------------ 372
            ..|.....:.||..:.:::|:|||::|.|.|||||.|.|...|||||...|:.            
Mouse   274 PCLTFVTPTLLAGDKSLSNVIAHEISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKF 338

  Fly   373 ----SLGVENINPEWRSMEQESLSNLLTIFRRDALESSHPISRPIQMVSEISE--SFDQISYQKG 431
                :||      .|     ..|.|.:..|     ..|||.::.:..:.::..  ::..|.|:||
Mouse   339 RHFHALG------GW-----GELQNTIKTF-----GESHPFTKLVVDLKDVDPDVAYSSIPYEKG 387

  Fly   432 STVLRMMHLFL-GEESFRSGLQAYLQKFSYKNAEQDNLWESLTQAAHKYRSLPKSYDIKSIMD-- 493
            ..:|..:...| |.|.|...|:||::||||::...|: |:|..     |.......|:.:.:|  
Mouse   388 FALLFYLEQLLGGPEVFLGFLKAYVKKFSYQSVTTDD-WKSFL-----YSHFKDKVDLLNQVDWN 446

  Fly   494 SWTLQTGYPVINVTRDYAARTAKLNQERYLLNTQVARAYRGGCWWVPL------SYTTQAVQDFN 552
            :|....|.|.:           |.|.:..|.|..:|.:.|    ||..      |::...::|.:
Mouse   447 TWLYAPGLPPV-----------KPNYDVTLTNACIALSQR----WVTAKEEDLSSFSIADLKDLS 496

  Fly   553 NTAPKAWMECGKNGESLPKTIQDLPGP 579
            :         .:..|.|.:.:|..|.|
Mouse   497 S---------HQLNEFLAQVLQKAPLP 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP1029NP_652618.1 M1_APN-Q_like 42..497 CDD:341064 122/514 (24%)
ERAP1_C 582..910 CDD:463368
Lta4hNP_032543.2 leuko_A4_hydro 6..608 CDD:274120 143/612 (23%)
Blue background indicates that the domain is not in the aligned region.

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