DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and nos1apa

DIOPT Version :9

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:XP_021332861.1 Gene:nos1apa / 553539 ZFINID:ZDB-GENE-081024-1 Length:505 Species:Danio rerio


Alignment Length:160 Identity:35/160 - (21%)
Similarity:62/160 - (38%) Gaps:37/160 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   336 DPTVQLVKKERYLLG------YLGSVETLAHKGTGVVCQAVRKIVGEY--GNSPTGQTCILEVSD 392
            |..:.|..:|.:..|      |:||::.........:..|:|:|..|:  .|....:..|: ||.
Zfish    15 DLRIPLHNEEAFQHGINFEAKYIGSLDVARPNSRVEIVAAMRRIRYEFKVKNIKKKKVNII-VSV 78

  Fly   393 QGLRMVDRSGPNQNKKDKK--------------PCIDYFYSLKNVSFCAFHPRDHRFIGFITKHP 443
            .|:::..|     .||.||              |....||       .:...:|.:...:|.:..
Zfish    79 DGVKVALR-----KKKKKKEWTWDESKMMVMQDPIYRIFY-------VSHDSQDLKIFSYIARDG 131

  Fly   444 TVQRFACHVFKGSESTRP--VAEAVGRAFQ 471
            ....|.|:|||..:.::.  :...||:||:
Zfish   132 QSNVFRCNVFKSKKKSQAMRIVRTVGQAFE 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735
PTB_JIP 343..490 CDD:269923 33/153 (22%)
nos1apaXP_021332861.1 PTB_CAPON-like 2..180 CDD:269968 35/160 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573998
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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