DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and CG8312

DIOPT Version :9

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_649918.1 Gene:CG8312 / 41163 FlyBaseID:FBgn0037720 Length:866 Species:Drosophila melanogaster


Alignment Length:352 Identity:69/352 - (19%)
Similarity:121/352 - (34%) Gaps:98/352 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IPNDDLED-SHSSKSDGDGSDQEDGIGLVDHEP-----------------------KMRQVEDDE 80
            :|.::.:. :.:..|..||||.:|...|:..:.                       .:.:::::|
  Fly   511 LPQEETKTMAAAGSSANDGSDSDDFEKLLKFDTTLSNELLPYFDMQLHKNSSQSMVSLSELKEEE 575

  Fly    81 LGDGLKV--TLSSDGSLDTNDSFNSHRHH---PLNH---QDAIGGFLGMDTSGLGGNSAPVTIGA 137
             |:.|.:  |::||.|.|....:|:..|.   |...   .|....||.........::|.:|:..
  Fly   576 -GEPLSLLPTINSDPSADPEADYNAEDHDVTAPRRSGVCSDGEEDFLDDADDHYFRHAAMLTMLH 639

  Fly   138 STDL----LAPNTAATRRRRKLPEIPKNKKSSILHLLGGSNFGSLADEFRNGGGGGIPPAVRSGQ 198
            .:.:    .|..|:...|.:....|..|..||           :.|......|||       |.|
  Fly   640 RSSMRKMRAADQTSLKYRHQTQSSISSNASSS-----------TTASTSAAAGGG-------SAQ 686

  Fly   199 QRSFLSLKCGYLMDEDSSPDSERMQSLGDVDSG---HSTAHSPNDFKSMSPQITSP--VSQSPFP 258
            |..             :||||:.    |.:.||   .||..:.|..:..|.:::.|  :.|||  
  Fly   687 QGL-------------TSPDSDE----GSISSGCETASTVTNANHEEYNSKRVSDPGQLEQSP-- 732

  Fly   259 PPFGGVPFGQLEMLEATHRGLHKFVPRHHDEIELEIGDAIYVQKEAEDLWCEGVNLRTGRQGIFP 323
                     .||:.:|..........|...::....|||......:      .:.|:....|...
  Fly   733 ---------DLELEQAQVLEQMMIYQRLEQQLRKNSGDATNYSSSS------SITLKRSNSGSDK 782

  Fly   324 SAYA--VDLDYNEFDPT--VQLVKKER 346
            ...:  .|.|.::.|.:  |:..:|||
  Fly   783 QERSDHPDDDNSDSDESGYVEFQEKER 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735 6/55 (11%)
PTB_JIP 343..490 CDD:269923 3/4 (75%)
CG8312NP_649918.1 PID_2 263..442 CDD:373244
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438620
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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