DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and CG42673

DIOPT Version :10

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_729510.1 Gene:CG42673 / 39111 FlyBaseID:FBgn0261555 Length:904 Species:Drosophila melanogaster


Alignment Length:394 Identity:76/394 - (19%)
Similarity:129/394 - (32%) Gaps:117/394 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FEEFHRPIFEPHTIAGFGSGAGSKKNNPHAFYSLIPNDDLEDSHSSKSDGDGSDQEDGIGLVDHE 70
            ||..|:  |..|            ||      ||.|||:..|..||:             |:|.|
  Fly   366 FEVCHK--FNLH------------KN------SLEPNDERSDISSSE-------------LLDVE 397

  Fly    71 PKMRQ--VEDDELGDGLKVTLSSDGSLDTNDSFNSHRHHPLNHQDAIGG----------FLGMDT 123
            ....|  .||.|.|.|...|...:....|.|..::....| ||.|.:..          ...:|.
  Fly   398 QISEQQLSEDGERGGGDNETPKKEHLAITPDLNHTQPQRP-NHLDIMPSHSSLRKSNSLLCDVDD 461

  Fly   124 SGLGGNSAP---VT----------------IG----ASTDLLAPNTAATRRRRKLPEIPKNKKSS 165
            ...|..|:|   :|                :|    ....|::...|....:.:..::.:..:..
  Fly   462 KSPGSPSSPRSEITQLKDQLEAQALQTRQALGQLMLVREQLISETNARIEAQARTQQLLQQNREL 526

  Fly   166 ILHL--LGGSNFGSLADEFRNGGGGGIPPA-VRSGQQRSFLSLKCGYLMDEDSSPD-----SERM 222
            :.||  ||..|....|         |:..| :....|:|.|.:    |:...|:.:     ::::
  Fly   527 LEHLASLGAYNEQQTA---------GLTSANIGMAPQQSQLQM----LLQATSNNNNLATINQQI 578

  Fly   223 QSLGDVDSG-HSTAHSPNDFKSMSPQI-------------------TSPVSQSPFPPPFGGVPFG 267
            .:||.::.. .|.:|..:.....|..:                   .:|.:.:|.|...|..|:.
  Fly   579 SNLGSINQQLTSLSHQLSGLNQQSQHLQNLQQQQQQQQQQQQQQTQAAPTAATPPPAAGGSSPYP 643

  Fly   268 QLEMLEATHRGLHKFVPRHHDEIELEIGDAIYVQKE-AEDLWCEGVNLRTGRQGIFPSAYAVDLD 331
            .:..|::....|.:  .:...:.:....|...|.:| ...|....:|...|:....|||.|    
  Fly   644 SMSALQSISNQLQQ--QQQQQQQDALSKDLFQVNQELLNRLQALNLNANPGQSQPTPSATA---- 702

  Fly   332 YNEF 335
            :|.|
  Fly   703 HNSF 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735 11/54 (20%)
PTB_JIP 343..490 CDD:269923
CG42673NP_729510.1 PH-like <352..386 CDD:473070 12/39 (31%)
Blue background indicates that the domain is not in the aligned region.

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