DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and CG14968

DIOPT Version :9

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_647800.1 Gene:CG14968 / 38406 FlyBaseID:FBgn0035431 Length:199 Species:Drosophila melanogaster


Alignment Length:140 Identity:32/140 - (22%)
Similarity:52/140 - (37%) Gaps:22/140 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 YLGSVETLAHKGTGVVCQAVRKIVGEYGNSPTGQ---TCILEVSDQGLRMVDRSGPNQNKKDKKP 412
            |:||.......|.....:.|..:||...|.|..:   .|.|:||..|:::...|        .|.
  Fly    28 YIGSEVARGLWGIKYTRRPVDIMVGVAKNLPPNKVLPNCELKVSTDGVQLEIIS--------PKA 84

  Fly   413 CIDYF-YSLKNVSFCAFHPRDHRFIGFI------TKHP-TVQRFACHVFKGSESTRPVAEAVGRA 469
            .|::: |.:..:|:........|....|      :.|| .|..|.|   ......|.:..|:..|
  Fly    85 SINHWSYPIDTISYGVQDLVYTRVFAMIVVKDESSPHPFEVHAFVC---DSRAMARKLTFALAAA 146

  Fly   470 FQRFYQKFIE 479
            ||.:.::..|
  Fly   147 FQDYSRRVKE 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735
PTB_JIP 343..490 CDD:269923 32/140 (23%)
CG14968NP_647800.1 PTB_LDLRAP_insect-like 23..147 CDD:269982 28/129 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11232
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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