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Protein Alignment Aplip1 and Fam43b
DIOPT Version :9
Sequence 1: | NP_728573.1 |
Gene: | Aplip1 / 53472 |
FlyBaseID: | FBgn0040281 |
Length: | 490 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006239356.1 |
Gene: | Fam43b / 313650 |
RGDID: | 1560959 |
Length: | 330 |
Species: | Rattus norvegicus |
Alignment Length: | 169 |
Identity: | 44/169 - (26%) |
Similarity: | 67/169 - (39%) |
Gaps: | 25/169 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 315 RTGRQGIFPSAYAVDLDYNEFDPTVQLVKKERYLLGYLGSVETLAHKGTGVVCQAVRKIVGEYGN 379
|.|| :|.|. ...::.|:.||| |.:.|||:..||..||.|....||.:|....|
Rat 51 RLGR--VFRSR-RQKVELNKEDPT--------YTVWYLGNAVTLHAKGDGCTDDAVGRIWARCG- 103
Fly 380 SPTGQTCI-LEVSDQGLRMVDRSGPNQNKKDKKPCIDYFYSLKNVSFCAFHPRDHRFIGFITKHP 443
|.|.|.: |.:...|:||......:.....::|. :.|.|..:::||...|..|...::.:|.
Rat 104 -PGGGTKMKLTLGPHGIRMQPSERGSGGSGGRRPA--HAYLLPRITYCAADGRHPRVFTWVYRHQ 165
Fly 444 TVQR---FACH------VFKGSESTRPVAEAVGRAFQRF 473
...: ..|| ..|.....|.:.:....||..|
Rat 166 ARHKAVVLRCHAVLLARAHKARSLARLLHQTALAAFSDF 204
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166334783 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.840 |
|
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