DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and jip-1

DIOPT Version :9

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001364697.1 Gene:jip-1 / 173513 WormBaseID:WBGene00002176 Length:1001 Species:Caenorhabditis elegans


Alignment Length:428 Identity:134/428 - (31%)
Similarity:204/428 - (47%) Gaps:97/428 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 DAIGGFLGMD---------TSGLGGNSAPVTIGASTDL-----------LAPNTAATRRRRKLPE 157
            |.|....||:         |:|:|...|...|.....|           :.|:...:...|:||.
 Worm   621 DTIRQSSGMETRTINSTTGTNGIGSAGAAGKIDPCAHLETPISPHIFQSVLPSPTPSSSGRRLPA 685

  Fly   158 IPKNKKSSILHLLGGSNFGSLADEFRNGGGGGIPP----------------AVRSGQQRSFLSLK 206
            :|.|..:.:..:...|                |||                ...|..:||.|.::
 Worm   686 LPINSAALLRRIPMAS----------------IPPNPPQKHQDHQLCFMDGMADSMMERSSLGME 734

  Fly   207 CGYLMDEDSSPDSERMQSLGDVDSGHSTAHSPNDFKSMSPQITSPVSQSPFPPPFGGVPFGQLEM 271
            ..|..::..:.:..|.|.       ..:..||:|...:|...||. ||:|               
 Worm   735 DSYYEEDGINGNRRRRQQ-------RKSFFSPDDSSGVSSCTTSD-SQNP--------------- 776

  Fly   272 LEATHRGLHKFVPRHHDEIELEIGDAIYVQKEAEDLWCEGVNLRTGRQGIFPSAYAVDLDYNE-- 334
               |||....|.|||.||:.||||||::|.:.|:|.|..|.|||||:.||||::...::|..|  
 Worm   777 ---THRVQSAFHPRHPDELLLEIGDAVHVDRTADDHWSYGTNLRTGQSGIFPASIVCEIDLVEEI 838

  Fly   335 ---FDPT--VQLVKKER--YLLGYLGSVETLAHKGTGVVCQAVRKIVGEYGNSP---TGQTCILE 389
               ..||  .:::..:|  :.|..|.|:|...|||..|:.||:.|::..|.||.   ..||.::|
 Worm   839 CLGALPTNATKILSGDRDTFYLTMLASIEVAHHKGNDVLTQAMNKVLSMYKNSEEIIVPQTVLME 903

  Fly   390 VSDQGLRMVDRSGPNQNKKD--KKPCIDYFYSLKNVSFCAFHPRDHRFIGFITKHPTVQRFACHV 452
            :|.:|:.::|:     .:|:  :.|..|:||||:|:|||..||:..::.|||||||.:.||||||
 Worm   904 ISFRGIHVIDK-----RRKNFFQCPMFDFFYSLQNISFCGAHPKQLKYFGFITKHPLLPRFACHV 963

  Fly   453 FKGSESTRPVAEAVGRAFQRFYQKFIETAYPIEDIYIE 490
            |....:|:|:.||:||||:|.|.:::..|:|.||||:|
 Worm   964 FMSKNTTQPIVEAIGRAFKRSYDEYMAFAHPTEDIYLE 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735 29/53 (55%)
PTB_JIP 343..490 CDD:269923 64/153 (42%)
jip-1NP_001364697.1 SH3_JIP1_like 777..831 CDD:212735 29/53 (55%)
PTB_JIP 855..1001 CDD:269923 64/150 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159765
Domainoid 1 1.000 108 1.000 Domainoid score I4068
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D360087at33208
OrthoFinder 1 1.000 - - FOG0003016
OrthoInspector 1 1.000 - - oto17493
orthoMCL 1 0.900 - - OOG6_108705
Panther 1 1.100 - - LDO PTHR11232
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3474
SonicParanoid 1 1.000 - - X2453
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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