DRSC/TRiP Functional Genomics Resources

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Protein Alignment Aplip1 and C13h1orf226

DIOPT Version :10

Sequence 1:NP_728573.1 Gene:Aplip1 / 53472 FlyBaseID:FBgn0040281 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001177388.2 Gene:C13h1orf226 / 100361087 RGDID:2320873 Length:270 Species:Rattus norvegicus


Alignment Length:247 Identity:56/247 - (22%)
Similarity:81/247 - (32%) Gaps:65/247 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DGLKVTLSSDGSLDTNDSFNSHRHHPLNHQDAIGGFLGMDTSGLGGNSAP-VTIGASTDL--LAP 144
            :.|..||:.  .|.::.|| .|...|        |..|..|.|.|....| :.:|:|..|  |..
  Rat     3 ENLNTTLTP--KLQSSHSF-PHLSRP--------GAPGTITPGSGEPGGPGLRVGSSQHLRNLGK 56

  Fly   145 NTAATRRRRKLPEIPKNKKSSILHLLGGSNFGSLADEFRNGGGGGI------------------- 190
            ...|     |:.::.:.|:||.|..:|.......|:....||....                   
  Rat    57 AVGA-----KVNDLLRRKESSSLGSVGVMEINKTAEAQMPGGEDAACGPWLEDERSVQEAFPLLD 116

  Fly   191 --PPAVRSGQQRSFLSLKCGYLMDEDSSPDSERMQSLGDVDSGHSTAHSPNDFKSMSPQITSPVS 253
              ||..|   :|:..:||....|...|.|....::        :.|..||...:. ||....|||
  Rat   117 PPPPITR---KRTPRALKTTQDMLISSQPVLSNLE--------YGTELSPGQAQD-SPPTAQPVS 169

  Fly   254 QSPFPPPFGGVPFGQLEMLEATHRGLHKFVPRHHDEIELEIGDAIYVQKEAE 305
            .....|.   ...|..|..||...|          |:.|.:.|.|:...:.|
  Rat   170 ADTSRPE---STTGMGEKGEALPNG----------EVSLLVPDLIHKNSQEE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Aplip1NP_728573.1 SH3_JIP1_like 275..329 CDD:212735 6/31 (19%)
PTB_JIP 343..490 CDD:269923
C13h1orf226NP_001177388.2 DUF4628 1..270 CDD:464712 56/247 (23%)
Blue background indicates that the domain is not in the aligned region.

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