DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP555 and fsn-1

DIOPT Version :9

Sequence 1:NP_001260073.1 Gene:SP555 / 53471 FlyBaseID:FBgn0260470 Length:301 Species:Drosophila melanogaster
Sequence 2:NP_498046.1 Gene:fsn-1 / 175667 WormBaseID:WBGene00001499 Length:332 Species:Caenorhabditis elegans


Alignment Length:286 Identity:71/286 - (24%)
Similarity:110/286 - (38%) Gaps:84/286 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQQAHPHPIAAIAPRRRRPTGRRGGVTGGLSSGSLDASSSTSPPP------RFCPLPN------- 59
            |:|..||   :|.|||||...|.            :.|:|..|..      ::.||.:       
 Worm    59 PKQLTPH---SIPPRRRRSPRRP------------EVSASRLPLKVLNQIFQYLPLKDLRSAMLT 108

  Fly    60 --------GVEDN--WTWSKRHRSKEVVLRGP--------------------------------- 81
                    .:||:  |.:....:..|..:..|                                 
 Worm   109 CHSWNNALSMEDSDIWQYLLGKKLPEAAVSDPFLLAELGSAKKKLRAWYFAWNTSDISRNNYIRT 173

  Fly    82 NSRTVHFHPNWSKGTAGVQGKRSLNNGRHYWELHVSQRVFGTSIMFGIGTKSARLHANAFRNMLG 146
            |..|||..| .::.|.||:|||.::.|.|.::: ......||..:.||.||.|.||...:..:||
 Worm   174 NGFTVHRQP-VAQSTDGVRGKRGISKGVHAFDI-TWDGPLGTVAVVGIATKHAALHCVGYVALLG 236

  Fly   147 ENEHGWGLS-HKGVLWHEGVAL-LYTKRFRENQP-----TQIGVLFDGIEGTLTFYKDGKCLGVA 204
            .::..||.: ...||.|.|..| :|.|  ..|.|     .:|.::.|.......|.::.:.||:|
 Worm   237 SDDQSWGWNLVDNVLMHNGAQLGVYPK--MNNPPKYEVGDKIRLIIDCDTHVAYFERNSEFLGIA 299

  Fly   205 FRGLDQIDEPLYPIVCSTAAKTEMTL 230
            |..:..:  .|||.||:....||:|:
 Worm   300 FNHIPPL--RLYPAVCAVYGNTEVTM 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP555NP_001260073.1 SPRY_SOCS3 64..249 CDD:293936 53/209 (25%)
SOCS 240..273 CDD:295349
fsn-1NP_498046.1 F-box 83..127 CDD:279040 7/43 (16%)
SPRY_Fbox 158..332 CDD:293964 50/172 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3953
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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