DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP555 and trim65

DIOPT Version :10

Sequence 1:NP_723047.1 Gene:SP555 / 53471 FlyBaseID:FBgn0260470 Length:301 Species:Drosophila melanogaster
Sequence 2:XP_001920401.1 Gene:trim65 / 100149099 ZFINID:ZDB-GENE-130613-1 Length:512 Species:Danio rerio


Alignment Length:238 Identity:58/238 - (24%)
Similarity:89/238 - (37%) Gaps:41/238 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQQAHPHPIAAIAPRRRRPT--GRRGGVTGGLSSGSLDASSSTSPPPRFCPLPNGVEDNWTWSKR 70
            ||.  ..|:.|:.|....|:  ..|.|:.....:.:.|              |.....:...|:.
Zfish   305 PQD--KRPVLAVVPSPATPSYPAEREGLNAYHCALTFD--------------PRTANAHLRLSQS 353

  Fly    71 HRSKEVVLRGPNSRTV-----HFHPNWSKGTAGVQGKRSLNNGRHYWELHVSQRVFGTSIMFGIG 130
            :|..|.::.||  |.|     .|...|.     |...:...:|:|||||.||:    .....|:.
Zfish   354 NRRAEHLVSGP--RPVPADESRFDHTWQ-----VLCFQGFTSGQHYWELEVSK----PWAYIGVT 407

  Fly   131 TKSARLHANAFRNMLGENEHGWGL---SHKGVLWHEGVALLYTKRFRENQPTQIGVLFDGIEGTL 192
            ..:........|.|:|.|:..|.|   ..:...||.|.......:.....|.:||:|.|...|||
Zfish   408 YPNIPRKQKGKRCMVGMNDLSWSLQLDERQMSAWHAGCKETVAGQLDNTHPLRIGLLLDYEAGTL 472

  Fly   193 TFYKDGKCLGVAFRGLDQIDEPLYPIVCSTAAKTEMTLKCTRR 235
            |:|.:|:....||..:  .::.|:| .|.......:|| |..|
Zfish   473 TYYGEGQVRLHAFHCV--FNQALFP-ACWIGEGVTVTL-CEPR 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP555NP_723047.1 SPRY_SOCS3 64..249 CDD:293936 48/180 (27%)
SOCS 240..273 CDD:470605
trim65XP_001920401.1 RING_Ubox 1..64 CDD:473075
Bbox_SF 94..132 CDD:469587
COG4372 <130..>236 CDD:443500
SPRY 327..508 CDD:470632 50/209 (24%)
Blue background indicates that the domain is not in the aligned region.

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