DRSC/TRiP Functional Genomics Resources

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Protein Alignment SP555 and trim47

DIOPT Version :10

Sequence 1:NP_723047.1 Gene:SP555 / 53471 FlyBaseID:FBgn0260470 Length:301 Species:Drosophila melanogaster
Sequence 2:XP_012826964.2 Gene:trim47 / 100127579 XenbaseID:XB-GENE-5961140 Length:490 Species:Xenopus tropicalis


Alignment Length:220 Identity:51/220 - (23%)
Similarity:76/220 - (34%) Gaps:66/220 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DVEVDPQQAHPHPIAAIAPRRRRPTGRRGGVTGGLSSGSLDASSSTSPPPRFCPL-PNGVEDNWT 66
            |:.:||..|| |.::.:...||                            ..|.| |.|..||  
 Frog   299 DITLDPNTAH-HNLSLMQGNRR----------------------------VLCKLQPQGYPDN-- 332

  Fly    67 WSKRHRSKEVVLRGPNSRTVHFHPNWSKGTAGVQGKRSLNNGRHYWELHVSQRVFGTSIMFGIGT 131
                           ..|..|:        ..|.|...|..|:||||:.:|    |..:..|:..
 Frog   333 ---------------PGRFNHY--------TQVLGHEPLGQGQHYWEVQLS----GNRVSLGVSY 370

  Fly   132 KSARLHANAFRNMLGENEHGWGL---SHKGVLWHEGVALLYTKRFRENQPTQIGVLFDGIEGTLT 193
            .|.....:....:.|.|.|.|.|   :.:...||:|..:|..    ..|...:||..|...|:|:
 Frog   371 GSIYRKGHQSHCLAGRNSHSWCLEWTNTRCYAWHDGQRILVA----TGQQECLGVFLDWDRGSLS 431

  Fly   194 FYKDGKCLGVAFRGLDQIDEPLYPI 218
            |::..:.:.|..|......||:|||
 Frog   432 FHEVSEDMPVLHRFHTSFIEPVYPI 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SP555NP_723047.1 SPRY_SOCS3 64..249 CDD:293936 38/158 (24%)
SOCS 240..273 CDD:470605
trim47XP_012826964.2 RING_Ubox 10..78 CDD:473075
SPRY 290..466 CDD:470632 51/220 (23%)
Blue background indicates that the domain is not in the aligned region.

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