DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and HB-3

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_568309.2 Gene:HB-3 / 831367 AraportID:AT5G15150 Length:314 Species:Arabidopsis thaliana


Alignment Length:253 Identity:61/253 - (24%)
Similarity:101/253 - (39%) Gaps:72/253 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 NSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHI 417
            |:...|:|    |.|...||....|     |.|....:.:.:..|::.:...:|.:|..|:..:.
plant    38 NAHHLPSP----TSLPSCPPHLFYG-----GGGNYMMNRSMSFTGVSDHHHLTQKSPTTTNNMND 93

  Fly   418 VDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALE 482
            .|:.     |.:.                  |||....|....:|  ||:     .:.:|:.|||
plant    94 QDQV-----GEED------------------NLSDDGSHMMLGEK--KKR-----LNLEQVRALE 128

  Fly   483 KTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDC 547
            |:||....|....:.:||.|||:...|:.:||||||.:|:.:.......:.:||.|:        
plant   129 KSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDV-------- 185

  Fly   548 SETMDSDNESL-----------------DMGESPAQNKR----CRSNSSGSSQQQQDN 584
               :.|||:||                 |..|| |:.||    ...:::||::...:|
plant   186 ---LKSDNDSLLAHNKKLHAELVALKKHDRKES-AKIKREFAEASWSNNGSTENNHNN 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 10/34 (29%)
Homeodomain 465..523 CDD:459649 23/57 (40%)
HB-3NP_568309.2 Homeodomain 115..168 CDD:459649 23/59 (39%)
HALZ 170..208 CDD:460477 8/48 (17%)

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