DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and HB16

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_195716.1 Gene:HB16 / 830169 AraportID:AT4G40060 Length:294 Species:Arabidopsis thaliana


Alignment Length:115 Identity:37/115 - (32%)
Similarity:55/115 - (47%) Gaps:13/115 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   445 TMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQ 509
            |:....|.:|.|...::|..:.|       ..|:.||||.||....|....:.|||..||:...|
plant    42 TLIEEYSGNHHHMGLSEKKRRLK-------VDQVKALEKNFELENKLEPERKTKLAQELGLQPRQ 99

  Fly   510 VKVWFQNRRTKWR-KRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNESL 558
            |.|||||||.:|: |:...:....|.:.|.:..:.|     ::..||:||
plant   100 VAVWFQNRRARWKTKQLEKDYGVLKGQYDSLRHNFD-----SLRRDNDSL 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeobox 469..523 CDD:395001 23/54 (43%)
HB16NP_195716.1 Homeobox 59..112 CDD:395001 24/59 (41%)
HALZ 114..155 CDD:396657 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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