DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and HAT1

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_193476.1 Gene:HAT1 / 827457 AraportID:AT4G17460 Length:282 Species:Arabidopsis thaliana


Alignment Length:186 Identity:44/186 - (23%)
Similarity:71/186 - (38%) Gaps:38/186 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 TSAGLSALTGAGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAW 438
            |:..|...||...|..:|::..:|..: .::.:|    |..|...|...:               
plant    67 TTVDLEEETGVSSPNSTISSTVSGKRR-STEREG----TSGGGCGDDLDI--------------- 111

  Fly   439 RERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYAL 503
              .|..:.|...|...:     |..|:....:...|..|...||.||::...|...::..||..|
plant   112 --TLDRSSSRGTSDEEE-----DYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKL 169

  Fly   504 GMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNESLD 559
            |::..||:|||||||           |..|.||.::..:....|.|.:..:|..|:
plant   170 GLTARQVEVWFQNRR-----------ARTKLKQTEVDCEYLKRCVEKLTEENRRLE 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 4/13 (31%)
Homeobox 469..523 CDD:395001 20/53 (38%)
HAT1NP_193476.1 HD-ZIP_N 8..98 CDD:282474 7/31 (23%)
HOX 134..188 CDD:197696 21/64 (33%)
HALZ 190..233 CDD:128634 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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