DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and HB-1

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_186796.1 Gene:HB-1 / 821138 AraportID:AT3G01470 Length:272 Species:Arabidopsis thaliana


Alignment Length:197 Identity:49/197 - (24%)
Similarity:74/197 - (37%) Gaps:55/197 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   434 NPIAWRERLSNTMSANLSQSHQHHP-------------SNDKDGKKKHTRPTFSGQQIFALEKTF 485
            ||:.......:.|  |:.::.:..|             .:|:..:||....|   :|:..|||:|
plant    25 NPVVQGGGARSMM--NMEETSKRRPFFSSPEDLYDDDFYDDQLPEKKRRLTT---EQVHLLEKSF 84

  Fly   486 EQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWR-KRHAAEMATAKRKQDDMGGDNDGDCSE 549
            |....|....:.:||..||:...||.|||||||.:|: |:...:....|...|.:..:.|   |.
plant    85 ETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKSTYDQLLSNYD---SI 146

  Fly   550 TMDSD---------NESLD---------MGESPAQNK---------------RCRSNSSGSSQQQ 581
            .||:|         .|.|.         .|:.|..|:               |..|.|.||:...
plant   147 VMDNDKLRSEVTSLTEKLQGKQETANEPPGQVPEPNQLDPVYINAAAIKTEDRLSSGSVGSAVLD 211

  Fly   582 QD 583
            .|
plant   212 DD 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeobox 469..523 CDD:395001 22/54 (41%)
HB-1NP_186796.1 HOX 66..121 CDD:197696 23/57 (40%)
HALZ 123..165 CDD:396657 9/44 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.