DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and urad

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001073641.1 Gene:urad / 557735 ZFINID:ZDB-GENE-070112-472 Length:174 Species:Danio rerio


Alignment Length:65 Identity:12/65 - (18%)
Similarity:23/65 - (35%) Gaps:20/65 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 ESASPPPQGQNDYSPENLSS-QRAKFQHHHGVN---------PLALHNANHAGNPGCHNNNNHMD 285
            :|.:..|:.|.:.|...::: ..|:..|.:.:|         |..:          |...||..|
Zfish    76 QSGTLTPESQEEQSQAGMTTLDSAEIVHMYRLNSEYKERFGFPFVI----------CARLNNKAD 130

  Fly   286  285
            Zfish   131  130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 12/65 (18%)
Homeobox 469..523 CDD:395001
uradNP_001073641.1 OHCU_decarbox 7..162 CDD:401335 12/65 (18%)
Substrate binding 84..88 1/3 (33%)
Substrate binding 119..123 0/13 (0%)
Microbody targeting signal. /evidence=ECO:0000255 172..174
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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