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Protein Alignment HGTX and nkx2.2b
DIOPT Version :9
Sequence 1: | NP_001368954.1 |
Gene: | HGTX / 53446 |
FlyBaseID: | FBgn0040318 |
Length: | 587 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007783.2 |
Gene: | nkx2.2b / 493627 |
ZFINID: | ZDB-GENE-050217-3 |
Length: | 237 |
Species: | Danio rerio |
Alignment Length: | 92 |
Identity: | 38/92 - (41%) |
Similarity: | 54/92 - (58%) |
Gaps: | 3/92 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 435 PIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKL 499
|.|..|.|:..:||:.|...: |::..|||:..|..||..|.|.||:.|.|.:||:.|||..|
Zfish 67 PSASPEELNPELSADESVDRE---SSEDSGKKRKRRILFSKTQTFELERRFRQQRYLSAPEREHL 128
Fly 500 AYALGMSESQVKVWFQNRRTKWRKRHA 526
|..|.::.:|||:||||.|.|.::..|
Zfish 129 AKLLHLTPTQVKIWFQNHRYKVKRARA 155
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HGTX | NP_001368954.1 |
ROM1 |
179..>388 |
CDD:227709 |
|
Homeobox |
469..523 |
CDD:395001 |
26/53 (49%) |
nkx2.2b | NP_001007783.2 |
Homeobox |
98..151 |
CDD:278475 |
26/52 (50%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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