DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and NKX6-1

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_006159.2 Gene:NKX6-1 / 4825 HGNCID:7839 Length:367 Species:Homo sapiens


Alignment Length:371 Identity:150/371 - (40%)
Similarity:187/371 - (50%) Gaps:117/371 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 SFL--GPPLAALHSMTTEMK-----------GQGVGGSSASANGLSY------SHSPNSHLISDR 336
            :||  .||||||||| .|||           ..|...||:|::..|.      :|:|..  :...
Human    14 AFLLSSPPLAALHSM-AEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGG--LKPP 75

  Fly   337 GSGGSSSSSSTTTTNTNSQGAPNPHGIDTILSKPP-PVTS------------------------- 375
            .:||.||..|.    .....|..||||:.|||:|. ||.|                         
Human    76 ATGGLSSLGSP----PQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSA 136

  Fly   376 -----------AGLSALTG--AGIPRFS---------------IAAAAAGMAQYLSQSQGAPLKT 412
                       |..|:..|  ||:||||               .|||.|.:.:|     ..||..
Human   137 SAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRY-----PKPLAE 196

  Fly   413 HAGHIVDRTHLYWPGLQGLVANPIAWRE-RLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQ 476
            ..|    ||.::||   |::.:| .||: ||:.|       .||.....|||||:||||||||||
Human   197 LPG----RTPIFWP---GVMQSP-PWRDARLACT-------PHQGSILLDKDGKRKHTRPTFSGQ 246

  Fly   477 QIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDD--- 538
            |||||||||||||||||||||:|||:|||:|||||||||||||||||:|||||||||:|||.   
Human   247 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKHAAEMATAKKKQDSETE 311

  Fly   539 -MGG-----DNDGDCSETMD--SDNESLDMGESPAQNKRCRSNSSG 576
             :.|     :.|.|.::.:|  ||:|.:..     ..|:.:|:|.|
Human   312 RLKGASENEEEDDDYNKPLDPNSDDEKITQ-----LLKKHKSSSGG 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 43/154 (28%)
Homeobox 469..523 CDD:395001 50/53 (94%)
NKX6-1NP_006159.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..133 24/102 (24%)
Repressor domain. /evidence=ECO:0000250 102..268 71/185 (38%)
Homeobox 239..293 CDD:395001 50/53 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..367 23/64 (36%)
Involved in DNA-binding. /evidence=ECO:0000250 306..367 13/52 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5911
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001882
OrthoInspector 1 1.000 - - otm42262
orthoMCL 1 0.900 - - OOG6_109928
Panther 1 1.100 - - LDO PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.810

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