DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Dr

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:496 Identity:123/496 - (24%)
Similarity:171/496 - (34%) Gaps:156/496 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 NNNNNNNNNSSNNNNSSPLMLLKAAHGGGLKDSDSPSTTP------------------------- 183
            :.:|:.:|.||.|..||.|..|..:|..||....|| |:|                         
  Fly    43 SGSNSGSNMSSGNMTSSNLTNLSPSHPAGLNALASP-TSPSALLLAHQQHLLQQHQQHQQQQQQQ 106

  Fly   184 ------------PPA------SSRLHSDSSPS------PRYEHNSSPGVDSAKSYALSQRSSGAE 224
                        |||      :|||.:.|..|      ||...|.:  .|..::..    ||.|.
  Fly   107 QQAAALQLAAVHPPAHHLHKTTSRLSNFSVASLLADTRPRTPPNQA--ADGPQNLT----SSAAT 165

  Fly   225 DP-CQTSESASPPPQGQNDYSPENLSSQRAKFQHHHGVNPLALHNANHAGNPGCHNNNNHMDHKL 288
            .| .|.|.:..|||.......|.|.....|...|.|      |..|.||....      |..|:.
  Fly   166 SPISQASSTPPPPPASAAAQVPANTFHPAAVAHHAH------LLQAAHAAAAA------HAQHQA 218

  Fly   289 PLSFL------------GPPLAALHSMTTEMKGQGVG--GSSASANGLSYSHSP-NSHLISD--- 335
            ..:.|            .||.:...:.::...|..:|  |:.||....:..||| .||..|:   
  Fly   219 MAAQLRQQQQQADARANSPPASTSSTPSSTPLGSALGSQGNVASTPAKNERHSPLGSHTDSELEY 283

  Fly   336 --------RGSGGSSSSSSTTTTNTNSQGAP---------------NPHGIDTILSKPPP---VT 374
                    .........|.....:.|:..:|               :|||       |||   :.
  Fly   284 DEEMLQDHEADHDEEEDSIVDIEDMNADDSPRSTPDGLDGSGKSLESPHG-------PPPGSHMQ 341

  Fly   375 SAGLS--ALTGAGIP----RFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVA 433
            |..||  ||....:|    .||..||||  ..:.....|.|               |||.:.:..
  Fly   342 STILSPAALASGHVPIRPTPFSALAAAA--VAWTGMGGGVP---------------WPGTRQMPP 389

  Fly   434 -NPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKH-----TRPTFSGQQIFALEKTFEQTKYLA 492
             .|............||       .|...|...:||     .|..|:.||:.:|||.|.:.:||:
  Fly   390 FGPPGMFPGAGFGGDAN-------EPPRIKCNLRKHKPNRKPRTPFTTQQLLSLEKKFREKQYLS 447

  Fly   493 GPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAK 533
            ..|||:.:.:|.::|:|||:||||||.|.::...||:...|
  Fly   448 IAERAEFSSSLRLTETQVKIWFQNRRAKAKRLQEAEIEKIK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 64/308 (21%)
Homeobox 469..523 CDD:395001 25/53 (47%)
DrNP_477324.1 Homeobox 424..477 CDD:278475 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I2937
eggNOG 1 0.900 - - E1_KOG0850
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.820

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