DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Antp

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:440 Identity:99/440 - (22%)
Similarity:159/440 - (36%) Gaps:112/440 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 NNNNNNNNSSNNNNSSPLMLLKAAH--GGGLKDSDSPSTTPPPASSRLHSDSSPSPRY------E 201
            :.||..:.:|...||.....:...|  |.|:.|.|:........::. |..:.|.||:      .
  Fly     4 STNNCESMTSYFTNSYMGADMHHGHYPGNGVTDLDAQQMHHYSQNAN-HQGNMPYPRFPPYDRMP 67

  Fly   202 HNSSPGVDSAKSYAL-------SQRSSGAEDPCQTS-ESASPPPQGQNDYSP-ENLSSQRAKF-- 255
            :.:..|:|..:.:.:       |.:..|.....||: :...|..|.|....| :|...|:|:.  
  Fly    68 YYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQNQQQQQAQQAP 132

  Fly   256 QHHHGVNPLALHNANHAGNPGCHNNNNHMDHKLPLSFLGPPLAALHSMTTEMKGQGV---GGSSA 317
            |......|.......|.          ....:.|:.:....|.|      .:.|.|:   |||..
  Fly   133 QQLQQQLPQVTQQVTHP----------QQQQQQPVVYASCKLQA------AVGGLGMVPEGGSPP 181

  Fly   318 SANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAP-------NPHGIDTILSKPPPVTS 375
            ..:.:| .|..|:.:......|...:....|..     |.|       |.|.:.....:      
  Fly   182 LVDQMS-GHHMNAQMTLPHHMGHPQAQLGYTDV-----GVPDVTEVHQNHHNMGMYQQQ------ 234

  Fly   376 AGLSALTGAGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRE 440
                    :|:|  .:.|...||   :.|.||.| :.|.||....|    |..|    ||     
  Fly   235 --------SGVP--PVGAPPQGM---MHQGQGPP-QMHQGHPGQHT----PPSQ----NP----- 272

  Fly   441 RLSNTMSANLSQSHQHHPS------NDKDGK---KKHTRPTFSGQQIFALEKTFEQTKYLAGPER 496
               |:.|:.:       ||      ..:.||   :|..|.|::..|...|||.|...:||....|
  Fly   273 ---NSQSSGM-------PSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRRRR 327

  Fly   497 AKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGD 546
            .::|:||.::|.|:|:||||||.||:|.:        :.:.:.|...:||
  Fly   328 IEIAHALCLTERQIKIWFQNRRMKWKKEN--------KTKGEPGSGGEGD 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 38/235 (16%)
Homeobox 469..523 CDD:395001 24/53 (45%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 42/199 (21%)
Homeobox 301..354 CDD:395001 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
32.910

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