Protein Alignment HGTX and pb

DIOPT Version :10

• Sequence 1: NP_001368954.1
• Gene: HGTX / 53446
• FlyBaseID: FBgn0040318
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Alignment Length: 291
• Identity: 72/291 - (24%)
• Similarity: 114/291 - (39%)
• Gaps: 47/291 - (16%)

  Fly   311 GVGGSSASANGLSYSHS-----PNSHLISDRGSGGSSSSSSTTTTNTNSQGA-----PNPHGIDT 365
            ||||...|.........     |:..:::.........|:.|....|.|:|.     |:......
  Fly    48 GVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLN 112

  Fly   366 ILSKPPPV--TSAGLSALTGAGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGL 428
            .||...|.  |..|..|:.|.|:          .:...:....|.|:     .:|.:|.   .|:
  Fly   113 HLSPESPKIGTPVGSGAIGGVGV----------NVNVNVGVGVGYPV-----GVVPQTP---DGM 159

  Fly   429 QGLVANPIAWRERLSNTMSANLSQSH----QHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTK 489
            ..:...|....::.|...|.|.:|..    :..|.|   |..:..|..::..|:..|||.|...|
  Fly   160 DSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPEN---GLPRRLRTAYTNTQLLELEKEFHFNK 221

  Fly   490 YLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSD 554
            ||..|.|.::|.:|.::|.||||||||||.| .||........:..:|.:.||:|.  |::..:.
  Fly   222 YLCRPRRIEIAASLDLTERQVKVWFQNRRMK-HKRQTLSKTDDEDNKDSLKGDDDQ--SDSNSNS 283

  Fly   555 NESLDMGESPA-------QNKRCRSNSSGSS 578
            .:|....|.|:       .|.|..:|::.|:
  Fly   284 KKSCQGCELPSDDIPDSTSNSRGHNNNTPSA 314

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HGTX	NP_001368954.1	ROM1	179..>388	CDD:227709	20/88 (23%)
		Homeodomain	465..523	CDD:459649	25/57 (44%)
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	25/56 (45%)