DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Noto

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001007473.1 Gene:Noto / 384452 MGIID:3053002 Length:240 Species:Mus musculus


Alignment Length:241 Identity:64/241 - (26%)
Similarity:104/241 - (43%) Gaps:77/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 SSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLSQS 405
            ::|...:|.|:.|..||.:.:|:      .|.|.|      ||:.:|    |..:.|:....|.|
Mouse    56 ATSLPLSTCTSLNLLGAVSQYGV------LPWVCS------TGSWLP----AYLSVGVYPLCSMS 104

  Fly   406 QGAPLKTHAGHIVDRTHLYWPGL------QGL---------VANPIAWRERLSNTMSANLSQSHQ 455
                              ..|||      |||         ...|:.|.                
Mouse   105 ------------------CVPGLNVTHHQQGLRLTGSELPYCLGPLKWA---------------- 135

  Fly   456 HHPSND-KD-GKKKHT---RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQ 515
              |:.| :| |.::||   |.||:.||:..|||.|.:...|.|.|||:||..|.::|:||::|||
Mouse   136 --PTVDLRDHGTERHTKRVRTTFNLQQLQELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQ 198

  Fly   516 NRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNESLDMG 561
            |||.|::|:...::.::. ..::....:||:    :.|::..|.:|
Mouse   199 NRRVKYQKQQKLKLPSSS-VMEEPSSSSDGN----IQSEDAELGIG 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 12/46 (26%)
Homeobox 469..523 CDD:395001 28/56 (50%)
NotoNP_001007473.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Homeobox 153..204 CDD:278475 26/50 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..240 5/37 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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