DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and HOXC8

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens


Alignment Length:319 Identity:80/319 - (25%)
Similarity:118/319 - (36%) Gaps:94/319 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 VNPL-ALHNANHAGNPGCHNNNNHMDHKLPLSFLGPPLAALHSMTTEMKGQGVGGSSASANGLSY 324
            |||| :.:.|..:..|.      :.|.:.|.|     :...|::.     .|.|||:.     .:
Human     6 VNPLFSKYKAGESLEPA------YYDCRFPQS-----VGRSHALV-----YGPGGSAP-----GF 49

  Fly   325 SHSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAPNP-----HGIDTILSKPPPVTSAGLSALTG- 383
            .|:  ||.:.|....|:|..|       ||....||     ||              ..|...| 
Human    50 QHA--SHHVQDFFHHGTSGIS-------NSGYQQNPCSLSCHG--------------DASKFYGY 91

  Fly   384 AGIPRFSI--AAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTM 446
            ..:||.|:  |...|.:.||......|...:..|             ||          .|:...
Human    92 EALPRQSLYGAQQEASVVQYPDCKSSANTNSSEG-------------QG----------HLNQNS 133

  Fly   447 SANL--SQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQ 509
            |.:|  .....|.|.      ::..|.|:|..|...|||.|....||....|.::::|||::|.|
Human   134 SPSLMFPWMRPHAPG------RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQ 192

  Fly   510 VKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNESLDMGESPAQNK 568
            ||:||||||.||:|         :..:|.:.|..|.:..|...::.|..: .|...:||
Human   193 VKIWFQNRRMKWKK---------ENNKDKLPGARDEEKVEEEGNEEEEKE-EEEKEENK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 29/133 (22%)
Homeodomain 465..523 CDD:459649 26/57 (46%)
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 9/68 (13%)
Antp-type hexapeptide 138..143 0/4 (0%)
Homeodomain 150..206 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 9/46 (20%)

Return to query results.
Submit another query.