DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and nkx2.5

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571496.2 Gene:nkx2.5 / 30696 ZFINID:ZDB-GENE-980526-321 Length:314 Species:Danio rerio


Alignment Length:294 Identity:71/294 - (24%)
Similarity:110/294 - (37%) Gaps:74/294 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 NSQGAPNPHGIDTILS---KPPPVTSAGLS-ALTGAGIPRFSIAAAAAGMAQYLSQSQGA----- 408
            :||....|..:..||:   ....:.|..:| .|..|.||..|...:.....|::....|:     
Zfish     5 SSQMTSTPFSVRDILNLEQNQEDMVSLDMSQRLDSALIPTSSCMLSTFKQEQFMEMPSGSSLFSE 69

  Fly   409 PLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSH--------QHHPSND---- 461
            .|:...|:.::..:.   ...|..|......:.:.:..:.:..:..        |..|..|    
Zfish    70 DLQEDKGNKINSINF---SASGFYAKNFLEMDYVKDAKTDDTFEDKEKKDIGCCQEDPGEDLKLD 131

  Fly   462 -----KDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKW 521
                 |..|::..|..||..|::.||:.|:|.|||:.|||..||..|.::.:|||:||||||.|.
Zfish   132 DAERPKQRKRRKPRVLFSQAQVYELERRFKQQKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKC 196

  Fly   522 RKRHAAEMATAKRKQD---DMGG------------DNDG-DCSETMDSDNESLDMG--------- 561
            :          :::||   :|.|            ..|| .|.....:.|.|.::|         
Zfish   197 K----------RQRQDQTLEMVGIAPPRRISVPVLVRDGKPCLGDTSTYNTSYNVGINHFTYNTY 251

  Fly   562 ------ESPA-QNKRCRSNSSGSS---QQQQDNY 585
                  .||. .|..|...||.||   .|...||
Zfish   252 PAFSNFPSPGNSNYSCNYPSSMSSIQPSQSNSNY 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 10/38 (26%)
Homeobox 469..523 CDD:395001 27/53 (51%)
nkx2.5NP_571496.2 Homeobox 144..197 CDD:306543 27/52 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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