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Protein Alignment HGTX and dlx6a
DIOPT Version :9
Sequence 1: | NP_001368954.1 |
Gene: | HGTX / 53446 |
FlyBaseID: | FBgn0040318 |
Length: | 587 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571398.1 |
Gene: | dlx6a / 30586 |
ZFINID: | ZDB-GENE-980526-448 |
Length: | 247 |
Species: | Danio rerio |
Alignment Length: | 118 |
Identity: | 41/118 - (34%) |
Similarity: | 60/118 - (50%) |
Gaps: | 37/118 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 443 SNTMSANLSQ---SHQHH----PS------------------------------NDKDGKKKHTR 470
||:.:.:|.. ||.|| || |.|..|.:..|
Zfish 65 SNSYNRSLPYSYVSHPHHSPYLPSYHSNASGTQTRLDATEQQKTTVIENGEIRFNGKGKKIRKPR 129
Fly 471 PTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRK 523
..:|..|:.||...|:||:|||.||||:||.:||::::|||:||||:|:|::|
Zfish 130 TIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
HGTX | NP_001368954.1 |
ROM1 |
179..>388 |
CDD:227709 |
|
Homeobox |
469..523 |
CDD:395001 |
28/53 (53%) |
Software error:
Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.
For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message
and the time and date of the error.