DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and noto

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_571130.1 Gene:noto / 30260 ZFINID:ZDB-GENE-990415-75 Length:241 Species:Danio rerio


Alignment Length:252 Identity:74/252 - (29%)
Similarity:110/252 - (43%) Gaps:67/252 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   341 SSSSSSTTTTNTNSQGAPNPHGIDTILSKP------------------PPVTSAGLSALTGAGIP 387
            |||..||..:.|          ||.:|::|                  .||:|:.| .|..:.:|
Zfish    25 SSSKPSTGKSFT----------IDALLARPDQAEMRERTNAYRSITNQTPVSSSAL-PLIYSQMP 78

  Fly   388 RFSIAAAAAGMAQYLSQSQ-GAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLS 451
            .|:       .:|.:.|:| |.|:..:..:....|      .:|.|           ....|.|:
Zfish    79 HFA-------YSQSIMQTQTGYPVFCYPPYNFQTT------CRGAV-----------YAQDAVLA 119

  Fly   452 QSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQN 516
            ::..|.....|.||.|..|.:|:..|:..|||.|.:.:|:.|.||..||.||.::|:||||||||
Zfish   120 KAAVHSHYKHKSGKSKRMRTSFTNDQLSRLEKEFARQQYMVGSERFLLASALQLTEAQVKVWFQN 184

  Fly   517 RRTKWRK----RHAAEMA----TAKRKQDDMGG--DNDGDCSETMDSDNESLDMGES 563
            ||.||||    :..|::|    |...|.....|  |.:.|.:|..|.|   :|:.:|
Zfish   185 RRIKWRKQSLEQQQAKLAKLGLTVPPKSPGSQGREDEERDFTEESDVD---IDIDDS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 15/64 (23%)
Homeobox 469..523 CDD:395001 28/53 (53%)
notoNP_571130.1 COG5576 79..>193 CDD:227863 46/137 (34%)
Homeobox 138..190 CDD:278475 27/51 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.