DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Dlx3

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:211 Identity:57/211 - (27%)
Similarity:92/211 - (43%) Gaps:57/211 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 NSHLISDRGSGGSSSSSSTTTTNTNSQGAP-------NPHGIDTILSKPPPVT---SAGLSALTG 383
            :|.|....||..|.:...::.|:.....||       .|:| .|:    .|.|   ...|:.|.|
  Rat    17 SSSLSCHAGSKDSPTLPESSVTDLGYYSAPQHDYYSGQPYG-QTV----NPYTYHHQFNLNGLAG 76

  Fly   384 AGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSA 448
            .|        |.:..::|   :.|...:.:.                      |:||:   .:.|
  Rat    77 TG--------AYSPKSEY---TYGGSYRQYG----------------------AYREQ---PLPA 105

  Fly   449 NLSQSHQHHPS------NDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSE 507
            ....|.:..|.      |.|..|.:..|..:|..|:.||::.|::.:|||.||||:||..||:::
  Rat   106 QDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQ 170

  Fly   508 SQVKVWFQNRRTKWRK 523
            :|||:||||||:|::|
  Rat   171 TQVKIWFQNRRSKFKK 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 17/68 (25%)
Homeobox 469..523 CDD:395001 27/53 (51%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:403572 20/120 (17%)
COG5576 <109..230 CDD:227863 33/78 (42%)
Homeobox 132..186 CDD:395001 27/53 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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