DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and tlx3b

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_739572.1 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:262 Identity:75/262 - (28%)
Similarity:108/262 - (41%) Gaps:90/262 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 TTEMKGQGVGGSSASANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNT-NSQGAP----NPHGI 363
            :|....:...|||:::.|..:..||.          |:|::..||.|.| :...||    :|:|:
Zfish    43 STRNSSESSSGSSSASGGCYHLGSPT----------GASATPYTTLTGTFHGIAAPYEESSPYGV 97

  Fly   364 DTILSK----------------PPPVTSA--GLSALTGAGIP------RFSIAAAAAGMAQYLSQ 404
            :..|:.                |||:.||  ||.:|:   .|      ||:....||.:..:   
Zfish    98 NLTLAPGGVIRVPAHRPLAAAVPPPMASAVPGLGSLS---FPWMESSQRFAKDRFAAALTPF--- 156

  Fly   405 SQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHT 469
                                                    |::..:...:|    |....|:|..
Zfish   157 ----------------------------------------TVARRIGHPYQ----NRTPPKRKKP 177

  Fly   470 RPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKR 534
            |.:||..||..|||.|.:.||||..|||.||..|.|:::|||.|||||||||| |..||...|:|
Zfish   178 RTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWR-RQTAEEREAER 241

  Fly   535 KQ 536
            :|
Zfish   242 QQ 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 27/112 (24%)
Homeobox 469..523 CDD:395001 32/53 (60%)
tlx3bNP_739572.1 Homeobox 177..230 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
21.870

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