DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and tlx1

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_739571.1 Gene:tlx1 / 266964 ZFINID:ZDB-GENE-021021-2 Length:301 Species:Danio rerio


Alignment Length:233 Identity:74/233 - (31%)
Similarity:107/233 - (45%) Gaps:50/233 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 SASANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSA 380
            |.:.|.::.:::.|:      .||.:.:|.|..:.|.| .|| |.:|                :.
Zfish    51 STAYNTMTGNYNVNN------SSGYNGNSCSVGSYNMN-LGA-NVNG----------------NC 91

  Fly   381 LTGAGIPRF-----------SIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVAN 434
            |..:|:.|.           ||..:||.:          |.....|.|.:.|.|.:|.::   :|
Zfish    92 LNSSGVIRVPAHRPLGSVHSSIPTSAATV----------PSMGSMGTINNLTGLTFPWME---SN 143

  Fly   435 PIAWRERLSNTMSANLSQSHQHHP-SNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAK 498
            ....::|.:..:|.........|| .|....|||..|.:|:..||..|||.|.:.||||..|||.
Zfish   144 RRYTKDRFTVALSPFTVTRRIGHPYQNRTPPKKKKPRTSFTRLQICELEKRFHRQKYLASAERAA 208

  Fly   499 LAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQ 536
            ||.||.|:::|||.|||||||||| |..||...|:|:|
Zfish   209 LAKALKMTDAQVKTWFQNRRTKWR-RQTAEEREAERQQ 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 15/71 (21%)
Homeobox 469..523 CDD:395001 32/53 (60%)
tlx1NP_739571.1 Homeobox 179..232 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.870

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