Protein Alignment HGTX and Msx2

DIOPT Version :9

• Sequence 1: NP_001368954.1
• Gene: HGTX / 53446
• FlyBaseID: FBgn0040318
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: NP_037114.2
• Gene: Msx2 / 25483
• RGDID: 3116
• Length: 267
• Species: Rattus norvegicus
• Alignment Length: 218
• Identity: 57/218 - (26%)
• Similarity: 84/218 - (38%)
• Gaps: 56/218 - (25%)

  Fly   337 GSGGSSSSSSTTTTNTNSQGAPNPHGIDTILS-KPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQ 400
            |.||:...:.......:|.    |..::.::| |.||..|           |......|:||...
  Rat    27 GPGGAEGGAEERRVKVSSL----PFSVEALMSDKKPPKES-----------PAVPPDCASAGAVL 76

  Fly   401 YLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGK 465
                   .||.. .||.|...|     ..|.:..|.       .|.|.....|....|...:.|:
  Rat    77 -------RPLLL-PGHGVRDAH-----SPGPLVKPF-------ETASVKSENSEDGAPWIQEPGR 121

  Fly   466 ----KKHTRPT----------------FSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQV 510
                .:|..||                |:..|:.|||:.|.|.:||:..|||:.:.:|.::|:||
  Rat   122 YSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQV 186

  Fly   511 KVWFQNRRTKWRKRHAAEMATAK 533
            |:||||||.|.::...||:...|
  Rat   187 KIWFQNRRAKAKRLQEAELEKLK 209

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HGTX	NP_001368954.1	ROM1	179..>388	CDD:227709	10/51 (20%)
		Homeobox	469..523	CDD:395001	26/69 (38%)
Msx2	NP_037114.2	Homeobox	145..199	CDD:395001	24/53 (45%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0850
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810