DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and Obox5

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_663755.2 Gene:Obox5 / 252829 MGIID:2149035 Length:291 Species:Mus musculus


Alignment Length:205 Identity:48/205 - (23%)
Similarity:83/205 - (40%) Gaps:46/205 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 AAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPG--LQGLVANPIAWRERLSNTMSANLSQSHQHH 457
            |..:|..:|||   ||.|             ||  :|..::.|   ...|....|...|:.....
Mouse    30 ARNLAFQMSQS---PLVT-------------PGSTMQSSLSVP---ERNLLQQESEGSSRQSGSM 75

  Fly   458 PSNDK----------DGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKV 512
            |.:||          ..|.:..|..::.:|...|:|.|::.:|....:..:||.::|:::.::|:
Mouse    76 PLSDKYVNKQTGPMASRKFRKERTVYTKEQQRLLQKHFDECQYPNEKKIMELAVSVGVTKMEIKI 140

  Fly   513 WFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSET--------MDSDN-ESL---DMGESPA 565
            ||:|.|.|:|:.:   :...|:...:..|.:......|        :.||| ||:   ..||...
Mouse   141 WFKNNRAKYRRMN---LQNIKQALPESNGISKAVSESTHFPGSIPVVASDNGESMCSGTFGEDSM 202

  Fly   566 QNKRCRSNSS 575
            ....|...||
Mouse   203 PKFNCSQESS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeobox 469..523 CDD:395001 15/53 (28%)
Obox5NP_663755.2 homeodomain 95..153 CDD:238039 16/57 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.