DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Obox7

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001033765.1 Gene:Obox7 / 194588 MGIID:3646231 Length:218 Species:Mus musculus


Alignment Length:190 Identity:45/190 - (23%)
Similarity:77/190 - (40%) Gaps:46/190 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 VDRTHLYWPG--LQGLVANPIAWRERLSNTMSANLSQSHQHHPS--------NDKDGKK------ 466
            :.::.|..||  :|..::.|    ||       ||.|.....||        :||...|      
Mouse    37 MSQSPLVTPGSTMQSSLSVP----ER-------NLLQQESEGPSRQSGCMPLSDKYVNKQTGLLA 90

  Fly   467 ----KHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAA 527
                :..|..:|.:|...|:|.|::.:|....:..:||..:|:::.::|.||:|.|.|:|:.:  
Mouse    91 SRNFRKERIVYSKEQQRLLQKHFDECQYPKEKKIVELAVLIGVTKMEIKKWFKNNRAKYRQMN-- 153

  Fly   528 EMATAKRKQDDMGGDNDGDCSET--------MDSDN-ESL---DMGESPAQNKRCRSNSS 575
             :...|:...:..|.:......|        :.||| ||:   ..||.......|...||
Mouse   154 -LQNIKQALPESNGSSKAVSESTHFPGSIPVVASDNGESICSGTFGEDSIPKFNCSQESS 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeobox 469..523 CDD:395001 16/53 (30%)
Obox7NP_001033765.1 homeodomain 95..153 CDD:238039 17/57 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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