DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and ceh-2

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_491746.1 Gene:ceh-2 / 191615 WormBaseID:WBGene00000429 Length:209 Species:Caenorhabditis elegans


Alignment Length:127 Identity:44/127 - (34%)
Similarity:56/127 - (44%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 WRERLSNTMSANLSQSHQHHPSNDKDG--------KKKHTRPTFSGQQIFALEKTFEQTKYLAGP 494
            |.|.|.:|.:|..         .|...        |.|..|..||..|:..|||.||...|:.|.
 Worm    99 WLELLQSTTAAQF---------GDVTAGLFLQPLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGN 154

  Fly   495 ERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNE 556
            ||.:||..|.::|:|||||||||||| .||...|           |.|.:...|...|.:::
 Worm   155 ERKQLAAKLSLTETQVKVWFQNRRTK-HKRVRLE-----------GSDPNAPMSNDEDDEDD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeobox 469..523 CDD:395001 29/53 (55%)
ceh-2NP_491746.1 Homeobox 130..182 CDD:278475 29/52 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0850
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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