DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and ceh-2

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_491746.1 Gene:ceh-2 / 191615 WormBaseID:WBGene00000429 Length:209 Species:Caenorhabditis elegans


Alignment Length:127 Identity:44/127 - (34%)
Similarity:56/127 - (44%) Gaps:29/127 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 WRERLSNTMSANLSQSHQHHPSNDKDG--------KKKHTRPTFSGQQIFALEKTFEQTKYLAGP 494
            |.|.|.:|.:|..         .|...        |.|..|..||..|:..|||.||...|:.|.
 Worm    99 WLELLQSTTAAQF---------GDVTAGLFLQPLRKNKRIRTAFSASQLIQLEKAFEGNHYVVGN 154

  Fly   495 ERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGDCSETMDSDNE 556
            ||.:||..|.::|:|||||||||||| .||...|           |.|.:...|...|.:::
 Worm   155 ERKQLAAKLSLTETQVKVWFQNRRTK-HKRVRLE-----------GSDPNAPMSNDEDDEDD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeodomain 465..523 CDD:459649 31/57 (54%)
ceh-2NP_491746.1 Homeodomain 127..183 CDD:459649 30/56 (54%)
Blue background indicates that the domain is not in the aligned region.

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