DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and Nkx2-2

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_035049.1 Gene:Nkx2-2 / 18088 MGIID:97347 Length:273 Species:Mus musculus


Alignment Length:204 Identity:60/204 - (29%)
Similarity:85/204 - (41%) Gaps:40/204 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   346 STTTTNTNSQ-----GAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLSQS 405
            |.|.|.|...     ..|:.:..|..:::.|...|.|         |..:..|...|... |...
Mouse     2 SLTNTKTGFSVKDILDLPDTNDEDGSVAEGPEEESEG---------PEPAKRAGPLGQGA-LDAV 56

  Fly   406 QGAPLKTHAGHIVDRTHLYW----PGLQ----GLVAN--PIAWRERLSNTMSANLSQSHQHHPSN 460
            |..|||:......|..:..|    .|||    ||.|:  |       .::.|.:...|....|.|
Mouse    57 QSLPLKSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPP-------QDSSSKSPEPSADESPDN 114

  Fly   461 DKD--------GKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNR 517
            ||:        |||:..|..||..|.:.||:.|.|.:||:.|||..||..:.::.:|||:||||.
Mouse   115 DKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNH 179

  Fly   518 RTKWRKRHA 526
            |.|.::..|
Mouse   180 RYKMKRARA 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 9/46 (20%)
Homeobox 469..523 CDD:395001 24/53 (45%)
Nkx2-2NP_035049.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..56 13/63 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..131 11/46 (24%)
Homeobox 131..185 CDD:395001 24/53 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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