DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and tlx2

DIOPT Version :9

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_005173139.1 Gene:tlx2 / 170781 ZFINID:ZDB-GENE-020208-1 Length:309 Species:Danio rerio


Alignment Length:331 Identity:86/331 - (25%)
Similarity:124/331 - (37%) Gaps:106/331 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 SYALSQRSSGAEDPCQTSESASPPPQGQNDYSPENLSSQRAKFQHHHGVNPLALHNANHAGNPGC 277
            |:.:.|..:|::   |:|....|...|..||                            |..|..
Zfish    20 SFGIDQILNGSD---QSSSCMLPSRTGDPDY----------------------------ALTPNV 53

  Fly   278 HNNNNHMDHKLPLSFLGPPLAALHSMTTEMK---GQGVGGSSASANGLSY--SHSPNSHLISDRG 337
            :|..|.|   .|...:...||..:::...|.   ...|..:|.:|.|:..  :|.|.        
Zfish    54 YNGYNSM---YPACSMAAGLAGSYNVNMNMNVSMNMNVNVNSGNAGGVIRVPAHRPM-------- 107

  Fly   338 SGGSSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYL 402
                               .|.||  ......||.:         .||||.....          
Zfish   108 -------------------PPAPH--QPTAGHPPSI---------AAGIPTMPTV---------- 132

  Fly   403 SQSQGAPLKTHAGHIVDRTHLY-WPGLQGLVANPIAWRERLSNTMSA-NLSQSHQHHPSNDKDGK 465
             .|.|:|            |.: :|.::.  :...| ::||:..:|. ::::...|...|....|
Zfish   133 -PSMGSP------------HSFTFPWMES--SRRFA-KDRLTAALSPFSVTRRIGHPYQNRTPPK 181

  Fly   466 KKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMA 530
            :|..|.:||..||..|||.|.:.||||..|||.||.||.|:::|||.|||||||||| |..||..
Zfish   182 RKKPRTSFSRVQICELEKRFHRQKYLASAERATLAKALKMTDAQVKTWFQNRRTKWR-RQTAEER 245

  Fly   531 TAKRKQ 536
            .|:|:|
Zfish   246 EAERQQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 32/179 (18%)
Homeobox 469..523 CDD:395001 33/53 (62%)
tlx2XP_005173139.1 Homeobox 185..238 CDD:278475 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.870

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