DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HGTX and Antp

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_061506838.1 Gene:Antp / 1272720 VectorBaseID:AGAMI1_006863 Length:324 Species:Anopheles gambiae


Alignment Length:465 Identity:88/465 - (18%)
Similarity:136/465 - (29%) Gaps:183/465 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 LAAAMSNGF--ADVHAH----AMAAADYQQQLADYHSAAAAAAVYANNNNNNNNNSSNNNNSSPL 162
            :.:..:|.:  :|:|.|    .:...|..||:..:|:.|.|                |..|..|.
Mosquito    11 MTSYFTNSYMNSDMHGHYPGTGVDGLDTSQQMYSHHNQAHA----------------NQANMPPY 59

  Fly   163 ----------MLLKAAHGGGLKDSDSPST-----TPPPASSRLHSDSSPSPRYEHNSSPGVDSAK 212
                      ...:.....|...:||||:     .||        .|:.:|..:....|......
Mosquito    60 PRFPPYDRMGYYQQTMDPAGYARADSPSSQVGGVIPP--------QSNGNPLQQTQVQPQQQQPI 116

  Fly   213 SYALSQRSSGAEDPCQTSESASPPPQGQNDYSPENLSSQRAKFQHHHGVNPLAL--HNANHAGNP 275
            .||          .|:...:....|.|...|..||.|....:..||.|...:.:  |:..|:...
Mosquito   117 VYA----------SCKLQAAVGNGPNGLGTYGTENGSPPLDQMGHHMGTAQMTIPQHHMGHSQGQ 171

  Fly   276 GCHNNNNHMDHKLPLSFLGPPLAALHSMTTEMKGQGVGGSSASANGLSYSHSPNSHLISDRGSGG 340
            .|:....|                                          .:| .|:.....:||
Mosquito   172 ECYPEQVH------------------------------------------QTP-QHMAMYTNAGG 193

  Fly   341 SSSSSSTTTTNTNSQGAPNPHGIDTILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQYLSQS 405
            .....:....|...|             :|||                             |.|.
Mosquito   194 GPPGVTQQQPNMMHQ-------------QPPP-----------------------------LHQG 216

  Fly   406 QGAPLKTHAGHIVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTR 470
            |.||                                 .|:.:|:.......:|......::|..|
Mosquito   217 QQAP---------------------------------PNSQNASSGLQSPLYPWMRSQFERKRGR 248

  Fly   471 PTFSGQQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRK 535
            .|::..|...|||.|...:||....|.::|:||.::|.|:|:||||||.||:|.:       |.|
Mosquito   249 QTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEN-------KTK 306

  Fly   536 QDDMGGD-ND 544
            .:...|| ||
Mosquito   307 GEPGSGDEND 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 32/215 (15%)
Homeodomain 465..523 CDD:459649 25/57 (44%)
AntpXP_061506838.1 None

Return to query results.
Submit another query.