Protein Alignment HGTX and hoxa9

DIOPT Version :10

• Sequence 1: NP_001368954.1
• Gene: HGTX / 53446
• FlyBaseID: FBgn0040318
• Length: 587
• Species: Drosophila melanogaster
• Sequence 2: XP_031760007.1
• Gene: hoxa9 / 116411596
• XenbaseID: XB-GENE-481973
• Length: 261
• Species: Xenopus tropicalis
• Alignment Length: 346
• Identity: 77/346 - (22%)
• Similarity: 117/346 - (33%)
• Gaps: 129/346 - (37%)

  Fly   193 DSSPSPRYEHNSSPGVDSAKSYALSQRSSGAEDPCQTSESASPPPQGQNDYSPENLSSQRAKFQH 257
            |....||:    :||       :|:|       |.:.:.||..|     |::|.:..|:.:.|..
 Frog    21 DDVVQPRF----APG-------SLTQ-------PPRQAASAEHP-----DFTPCSFQSKTSVFSS 62

  Fly   258 HHGVNPLALHNANHAGNPGCHNNNNHMDHKLPLSFLGPPLAA-----LHSMTTEMKGQGVGGSSA 317
            ..  |||         :|...||.:.:.|  |.....||::|     :.|....|
 Frog    63 PW--NPL---------HPQTANNVSSVYH--PYMHHQPPISASDGRYMRSWLDPM---------- 104

  Fly   318 SANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQG------APNPHGIDTILSKPPPVTSA 376
            :|..|.:...|:|                      .|.|      ||......|..|:|.||:..
 Frog   105 AAGSLPFPGFPSS----------------------RSYGIKPEPVAPRRGDCSTFDSRPLPVSDY 147

  Fly   377 GLSALTG----AGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANPIA 437
            ...:.|.    .|.|.|::.     ..:..|..:..|:..:                    ||.|
 Frog   148 PCGSPTDRDKQIGDPPFAVT-----NGENPSNGEKPPIDPN--------------------NPAA 187

  Fly   438 WRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFALEKTFEQTKYLAGPERAKLAYA 502
                  |.:.|             :..:||  |..::..|...|||.|....||....|.::|..
 Frog   188 ------NWLHA-------------RSTRKK--RCPYTKHQTLELEKEFLFNMYLTRDRRYEVARL 231

  Fly   503 LGMSESQVKVWFQNRRTKWRK 523
            |.::|.|||:||||||.|.:|
 Frog   232 LNLTERQVKIWFQNRRMKMKK 252

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HGTX	NP_001368954.1	ROM1	179..>388	CDD:227709	43/209 (21%)
		Homeodomain	465..523	CDD:459649	24/57 (42%)
hoxa9	XP_031760007.1	Hox9_act	1..182	CDD:461369	47/233 (20%)
		Homeodomain	196..252	CDD:459649	24/57 (42%)