Sequence 1: | NP_001368954.1 | Gene: | HGTX / 53446 | FlyBaseID: | FBgn0040318 | Length: | 587 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001795.2 | Gene: | CDX1 / 1044 | HGNCID: | 1805 | Length: | 265 | Species: | Homo sapiens |
Alignment Length: | 224 | Identity: | 58/224 - (25%) |
---|---|---|---|
Similarity: | 82/224 - (36%) | Gaps: | 40/224 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 356 GAPNPHGID---TILSKPPPVTSAGLSALTGAGIPRFSIAAAAAGMAQ-YLSQSQGAPLKTHAGH 416
Fly 417 IVDRTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHPSNDKDGKKKHTRPTFSGQQIFAL 481
Fly 482 EKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGD 546
Fly 547 CSETMDSDNESLDMGESPAQNKRCRSNSS 575 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
HGTX | NP_001368954.1 | ROM1 | 179..>388 | CDD:227709 | 8/34 (24%) |
Homeobox | 469..523 | CDD:395001 | 22/53 (42%) | ||
CDX1 | NP_001795.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 9..153 | 25/112 (22%) | |
Caudal_act | 13..138 | CDD:282574 | 22/88 (25%) | ||
Interaction with DNA. /evidence=ECO:0000305|PubMed:28473536 | 157..178 | 6/20 (30%) | |||
Homeobox | 158..210 | CDD:278475 | 22/51 (43%) | ||
Interaction with 5-mCpG DNA. /evidence=ECO:0000305|PubMed:28473536 | 196..207 | 8/10 (80%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 207..265 | 11/57 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0850 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X14 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.900 |