DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and tlx1

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_002936814.1 Gene:tlx1 / 100494864 XenbaseID:XB-GENE-485834 Length:311 Species:Xenopus tropicalis


Alignment Length:313 Identity:87/313 - (27%)
Similarity:113/313 - (36%) Gaps:118/313 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 GCHNNNNHMDHKLPLSF----------------LGPPL------------AALHSMTTEMKGQGV 312
            |.|  :.|..|..|:||                .||.|            :|.::||......|.
 Frog     5 GAH--HIHQTHAEPISFGIDQILNNPDQGSCMISGPRLQDSDYGLGCIVSSAYNTMTGNYSNSGT 67

  Fly   313 GGSSASANGLSYSHSPNSHLISDRGSGGSSSSSSTTTTNTNSQG---APNPHGIDTILSKP---- 370
            ||.|.||..::          |..||...:...:....|.||.|   .|....:.|.:.:|    
 Frog    68 GGYSNSACSMA----------SLTGSYNMNMGVTMNGNNLNSAGVIRVPAHRPLATSVHQPISTG 122

  Fly   371 -PPVTSAG----LSALTGAGIP-----------RFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVD 419
             |.|.|.|    ::.|||...|           ||::|                           
 Frog   123 MPTVPSVGSMNNMNNLTGLTFPWMESNRRYTKDRFTVA--------------------------- 160

  Fly   420 RTHLYWPGLQGLVANPIAWRERLSNTMSANLSQSHQHHP-SNDKDGKKKHTRPTFSGQQIFALEK 483
                         .:|.....|:.             || .|....|||..|.:|:..||..|||
 Frog   161 -------------LSPFTVTRRIG-------------HPYQNRTPPKKKKPRTSFTRLQICELEK 199

  Fly   484 TFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQ 536
            .|.:.||||..|||.||.||.|:::|||.|||||||||| |..||...|:|:|
 Frog   200 RFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR-RQTAEEREAERQQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 37/162 (23%)
Homeodomain 465..523 CDD:459649 35/57 (61%)
tlx1XP_002936814.1 Homeodomain 183..239 CDD:459649 34/56 (61%)

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