DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and LOC100486032

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_002934006.1 Gene:LOC100486032 / 100486032 XenbaseID:XB-GENE-29078139 Length:255 Species:Xenopus tropicalis


Alignment Length:241 Identity:66/241 - (27%)
Similarity:100/241 - (41%) Gaps:57/241 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   364 DTILSKPPPVT----SAGLSALTG--AGIPRFSIAAAAAGMAQYLSQSQGAPLKTHAGHIVDRTH 422
            :.:||:|..|:    .||...|.|  ...|.:.:.:..|....|...|..||..:...||.....
 Frog    31 EQLLSQPVSVSQLFPKAGFLPLPGLYPTAPIYHLPSLGATHPNYPYSSFSAPPASGHEHIKASLP 95

  Fly   423 L-YWPGLQ-GLVANPIAWRERLSNTMSANLSQSHQHHPSNDKD--GKKKHTRPTFSGQQIFALEK 483
            | :|  |: ||:                 |.:....|.|....  ||.:..|..|:.||:..||.
 Frog    96 LEHW--LRAGLL-----------------LHRGPDLHASAQPGLMGKCRRPRTAFTSQQLLELEN 141

  Fly   484 TFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMGGDNDGD-- 546
            .|:..|||:.|:|.::|.:|.::|:|||:||||||.||::         .||..:.|....||  
 Frog   142 QFKANKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR---------SRKAKEQGPSEQGDRP 197

  Fly   547 --CSETMDSDNESLDMGESPAQNKRCRSNSSGSSQQQ---QDNYRH 587
              ..:|:..::|..:..|            .|..||:   .|..||
 Frog   198 RAGGKTLSKEDEEEEEDE------------EGDFQQEGRGTDMLRH 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 8/29 (28%)
Homeodomain 465..523 CDD:459649 27/57 (47%)
LOC100486032XP_002934006.1 Homeodomain 125..181 CDD:459649 26/55 (47%)

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