DRSC/TRiP Functional Genomics Resources

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Protein Alignment HGTX and emx2

DIOPT Version :10

Sequence 1:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001128284.1 Gene:emx2 / 100038069 XenbaseID:XB-GENE-481028 Length:247 Species:Xenopus tropicalis


Alignment Length:198 Identity:51/198 - (25%)
Similarity:80/198 - (40%) Gaps:73/198 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   402 LSQSQGAPLKTHAGHIVDRTHLYWPGLQGLVANP-IAWRERLS---------------NTMSAN- 449
            ||.:..||:......       :.|..:|:.:|| :.:.|.:|               :.::|: 
 Frog    36 LSYANSAPMNPFLNG-------FHPTGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHP 93

  Fly   450 LSQSHQHHP----------------------------SNDKDG-----------KKKHTRPTFSG 475
            |..||..||                            .||...           |.|..|..||.
 Frog    94 LPTSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNDTSAESFLLHNALARKPKRIRTAFSP 158

  Fly   476 QQIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKRHAAEMATAKRKQDDMG 540
            .|:..||..||:..|:.|.||.:||::|.::|:||||||||||||::          ::|.::.|
 Frog   159 SQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFK----------RQKLEEEG 213

  Fly   541 GDN 543
            .|:
 Frog   214 SDS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709
Homeodomain 465..523 CDD:459649 30/57 (53%)
emx2NP_001128284.1 Homeodomain 150..206 CDD:459649 29/65 (45%)
Blue background indicates that the domain is not in the aligned region.

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