DRSC/TRiP Functional Genomics Resources

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Protein Alignment Roc1b and HRT1

DIOPT Version :10

Sequence 1:NP_652613.1 Gene:Roc1b / 53445 FlyBaseID:FBgn0040291 Length:122 Species:Drosophila melanogaster
Sequence 2:NP_014508.1 Gene:HRT1 / 853986 SGDID:S000005493 Length:121 Species:Saccharomyces cerevisiae


Alignment Length:125 Identity:63/125 - (50%)
Similarity:79/125 - (63%) Gaps:7/125 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAEEIEVEETEDFHDMDFNDEEPSCSGGAVQARTERFVVKKWVAHAMWGWDVAVDNCAICRNHIM 65
            |:.|::..:.::  |...|..:.|.....|:.:.:||.:|||.|.|.|.||:|||||||||||||
Yeast     1 MSNEVDRMDVDE--DESQNIAQSSNQSAPVETKKKRFEIKKWTAVAFWSWDIAVDNCAICRNHIM 63

  Fly    66 NLCIECQADPNANQD---ECTVAWGECNHAFHYHCIARWLKTRLVCPLDNKEWVYQKYGR 122
            ..|||||  |.|..|   ||..|||.||||||.|||.:|:|||..|||||:.|...:.||
Yeast    64 EPCIECQ--PKAMTDTDNECVAAWGVCNHAFHLHCINKWIKTRDACPLDNQPWQLARCGR 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Roc1bNP_652613.1 mRING-H2-C3H2C2D_RBX1 55..115 CDD:438148 42/62 (68%)
HRT1NP_014508.1 APC11 33..121 CDD:227521 55/89 (62%)

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