Protein Alignment Roc1b and lmgA

DIOPT Version :10

• Sequence 1: NP_652613.1
• Gene: Roc1b / 53445
• FlyBaseID: FBgn0040291
• Length: 122
• Species: Drosophila melanogaster
• Sequence 2: NP_001097122.1
• Gene: lmgA / 5740853
• FlyBaseID: FBgn0250903
• Length: 85
• Species: Drosophila melanogaster
• Alignment Length: 85
• Identity: 31/85 - (36%)
• Similarity: 44/85 - (51%)
• Gaps: 7/85 - (8%)

  Fly    36 RFVVKKWVAHAMWGWDVAVDNCAICRNHIMNLCIECQADPNANQDECTVAWGECNHAFHYHCIAR 100
            :..:|.|...|.|.|....:||.|||....:.|.|| |.|.   |:|.:.||.|:|.||.|||.:
  Fly     2 KVTIKSWTGVATWRWIANDENCGICRMSFESTCPEC-ALPG---DDCPLVWGVCSHCFHMHCIVK 62

  Fly   101 WLKTRLV---CPLDNKEWVY 117
            ||..:.:   ||:..:.|.:
  Fly    63 WLNLQPLNKQCPMCRQSWKF 82

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Roc1b	NP_652613.1	mRING-H2-C3H2C2D_RBX1	55..115	CDD:438148	25/62 (40%)
lmgA	NP_001097122.1	RING_Ubox	1..82	CDD:473075	31/83 (37%)